BLASTX nr result

ID: Dioscorea21_contig00037210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037210
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21076.1| unknown [Picea sitchensis]                             147   1e-33
ref|XP_002522262.1| DNA binding protein, putative [Ricinus commu...   146   2e-33
ref|NP_001044147.2| Os01g0731000 [Oryza sativa Japonica Group] g...   146   2e-33
ref|XP_004146021.1| PREDICTED: ubiquitin domain-containing prote...   145   3e-33
ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>gb|ABK21076.1| unknown [Picea sitchensis]
          Length = 114

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/114 (64%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +3

Query: 33  MGC-GTSLPEPDENEGHYTKVSKPNPWTYIKPITRTELMRMRDEFWDTAPHYGGHKEIWD 209
           MGC G+S    D   GH  K+ KP PW + +PITR +L +MRDEFWDTAPHYGG KEIWD
Sbjct: 1   MGCVGSSEKAVD---GHSKKIRKPKPWKHSEPITRAQLKQMRDEFWDTAPHYGGQKEIWD 57

Query: 210 XXXXXXXXXXXXXQSIVDSAGIIVTSADMTTCYDERGYKYELPKYVLSEPTNLI 371
                        ++IVDSAGIIVTS DMTTCYDERG KY+LPKYVLSEPTNLI
Sbjct: 58  ALRAAAEADLGLARAIVDSAGIIVTSDDMTTCYDERGAKYDLPKYVLSEPTNLI 111


>ref|XP_002522262.1| DNA binding protein, putative [Ricinus communis]
           gi|223538515|gb|EEF40120.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/113 (62%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
 Frame = +3

Query: 33  MGC-GTSLPEPDENEGHYTKVSKPNPWTYIKPITRTELMRMRDEFWDTAPHYGGHKEIWD 209
           MGC G+S  + D+   H  K+ KP PW + +PITRT+L++MRDEFWDTAPHYGG KEIWD
Sbjct: 1   MGCSGSSRAKGDD---HSKKIRKPKPWKHSEPITRTQLLQMRDEFWDTAPHYGGRKEIWD 57

Query: 210 XXXXXXXXXXXXXQSIVDSAGIIVTSADMTTCYDERGYKYELPKYVLSEPTNL 368
                        Q+IVDSAG+IV S DMT CYDERG KYELPKYVLSEPTNL
Sbjct: 58  ALHAAAEADLTLAQAIVDSAGVIVQSEDMTICYDERGAKYELPKYVLSEPTNL 110


>ref|NP_001044147.2| Os01g0731000 [Oryza sativa Japonica Group]
           gi|15289832|dbj|BAB63530.1| unknown protein [Oryza
           sativa Japonica Group] gi|218189004|gb|EEC71431.1|
           hypothetical protein OsI_03626 [Oryza sativa Indica
           Group] gi|222619205|gb|EEE55337.1| hypothetical protein
           OsJ_03349 [Oryza sativa Japonica Group]
           gi|255673654|dbj|BAF06061.2| Os01g0731000 [Oryza sativa
           Japonica Group]
          Length = 113

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/113 (61%), Positives = 81/113 (71%)
 Frame = +3

Query: 33  MGCGTSLPEPDENEGHYTKVSKPNPWTYIKPITRTELMRMRDEFWDTAPHYGGHKEIWDX 212
           MGC  S P+ D+N     K+ KP PW + + IT T+L +MRDEFWDTAPHYGG KEIWD 
Sbjct: 1   MGCAGSTPKTDDNS---KKLKKPKPWKHNQAITTTQLKQMRDEFWDTAPHYGGQKEIWDA 57

Query: 213 XXXXXXXXXXXXQSIVDSAGIIVTSADMTTCYDERGYKYELPKYVLSEPTNLI 371
                       Q+IVDSAGIIV+++DMT CYDERG KYELPKYVLSEPTNLI
Sbjct: 58  LRAAAEAELSLAQTIVDSAGIIVSNSDMTICYDERGAKYELPKYVLSEPTNLI 110


>ref|XP_004146021.1| PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis
           sativus] gi|449518063|ref|XP_004166063.1| PREDICTED:
           ubiquitin domain-containing protein 1-like [Cucumis
           sativus]
          Length = 111

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/113 (61%), Positives = 80/113 (70%)
 Frame = +3

Query: 33  MGCGTSLPEPDENEGHYTKVSKPNPWTYIKPITRTELMRMRDEFWDTAPHYGGHKEIWDX 212
           MGC  S     + +G   K+ KP PW   +PIT+T+L+RMRDEFWDTAPHYGG KEIWD 
Sbjct: 1   MGCAGS--SQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDA 58

Query: 213 XXXXXXXXXXXXQSIVDSAGIIVTSADMTTCYDERGYKYELPKYVLSEPTNLI 371
                       Q+IVDSAGIIV SAD+T CYDERG KYELPKYVLSEPTNL+
Sbjct: 59  LRAAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111


>ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/113 (60%), Positives = 83/113 (73%)
 Frame = +3

Query: 33  MGCGTSLPEPDENEGHYTKVSKPNPWTYIKPITRTELMRMRDEFWDTAPHYGGHKEIWDX 212
           MGC  S     +++G+  K+ KP PW + +PIT+++LM+MRDEFWDTAPHYGG KEIWD 
Sbjct: 1   MGCAGS--SQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPHYGGRKEIWDA 58

Query: 213 XXXXXXXXXXXXQSIVDSAGIIVTSADMTTCYDERGYKYELPKYVLSEPTNLI 371
                       Q+IVDSAG+IV +AD+T CYDERG KYELPKYVLSEPTNLI
Sbjct: 59  LRAAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLI 111


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