BLASTX nr result

ID: Dioscorea21_contig00037208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037208
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09
gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indi...    62   6e-08
gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indi...    61   8e-08
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indi...    61   1e-07

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/78 (33%), Positives = 47/78 (60%)
 Frame = -3

Query: 234 LRALYNRHNALLRQQNIFWGQRAKVQWVIKGDNNTKYFHNSCKVRQHKNKIHSIQDISGN 55
           +RAL  R + L +++ ++W QR++  W+  GD NTK+FH     R+ +N +  I++ +G 
Sbjct: 327 MRALDARMDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGE 386

Query: 54  IFLDHSGLESCFLNFFKN 1
            F D   +  CF ++F+N
Sbjct: 387 WFEDEDDVTECFAHYFEN 404


>gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
          Length = 1477

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = -3

Query: 246 HDIWLRALYNRHNALLRQQNIFWGQRAKVQWVIKGDNNTKYFHNSCKVRQHKNKIHSIQD 67
           HD  +R LY R + LL ++ + W QR++V W+ +GD NTK+FH     R  KNKI+ ++D
Sbjct: 559 HDGEIRKLYARLDELLYREEMMWLQRSRVSWLKEGDRNTKFFHRQAAWRAKKNKINRLKD 618

Query: 66  ISGNIFLDHSGLESCFLNFFK 4
                  +   +E    +FF+
Sbjct: 619 EDSRYVENKGDMEKLTRDFFQ 639


>gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indica Group]
           gi|222630991|gb|EEE63123.1| hypothetical protein
           OsJ_17931 [Oryza sativa Japonica Group]
          Length = 616

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/78 (34%), Positives = 47/78 (60%)
 Frame = -3

Query: 234 LRALYNRHNALLRQQNIFWGQRAKVQWVIKGDNNTKYFHNSCKVRQHKNKIHSIQDISGN 55
           LR L ++ + LL ++ + W QR+++ W+ +GD NT++FH+    R  KN+I  ++D  GN
Sbjct: 29  LRRLSDKLHELLYREEMLWLQRSRINWLKEGDRNTRFFHSRAVWRAKKNRISKLRDADGN 88

Query: 54  IFLDHSGLESCFLNFFKN 1
           +      LE+    +FKN
Sbjct: 89  VKTSIPVLENMATEYFKN 106


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = -3

Query: 204 LLRQQNIFWGQRAKVQWVIKGDNNTKYFHNSCKVRQHKNKIHSIQDISGNIFLDHSGLES 25
           LL Q+  FW QRAK+ W+ +G  NTKYFH+    R+ +N I ++ D +G +  D  GL+ 
Sbjct: 292 LLAQEEDFWRQRAKIYWLTEGGLNTKYFHSVATARRRRNVISALVDGAGTVVEDTEGLQG 351

Query: 24  CFLNFFKN 1
              ++F N
Sbjct: 352 VAKDYFTN 359


>gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
          Length = 1059

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/96 (33%), Positives = 51/96 (53%)
 Frame = -3

Query: 291 ISKIEQADALLHDS*HDIWLRALYNRHNALLRQQNIFWGQRAKVQWVIKGDNNTKYFHNS 112
           + ++  AD LLHD+     +R LY R + LL ++ + W QR++V W+ +GD NTK+FH  
Sbjct: 61  VEELSIADPLLHDA----EIRMLYARMDELLYREEMMWLQRSRVAWLKEGDRNTKFFHRQ 116

Query: 111 CKVRQHKNKIHSIQDISGNIFLDHSGLESCFLNFFK 4
              R  KNKI  ++        +   +E     FF+
Sbjct: 117 AAWRSKKNKITRLKAEDSRFVENKEEMEHMAREFFQ 152


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