BLASTX nr result

ID: Dioscorea21_contig00037182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037182
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    97   1e-18
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    97   1e-18
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]            97   1e-18
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    97   2e-18
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat...    97   2e-18

>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/90 (51%), Positives = 69/90 (76%)
 Frame = -3

Query: 399 EKIKDFFSRAAEIVNQIKSLGDVVPEKKVVQKILRSLPQKFEHVVTVIEETKDLSKVSMY 220
           EK+KD+FSR  EIVNQ++  G+ + ++KVV+KIL SLP+K+E++V  IEE+KDLS +++ 
Sbjct: 125 EKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQ 184

Query: 219 ELIGSLEAHEERVNKYSDQPIEQVFQTKLN 130
           +L+ SLE+HEER  +     IE  FQ+KL+
Sbjct: 185 QLMSSLESHEERKLQREGSSIENAFQSKLS 214


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/97 (49%), Positives = 70/97 (72%)
 Frame = -3

Query: 405 NGEKIKDFFSRAAEIVNQIKSLGDVVPEKKVVQKILRSLPQKFEHVVTVIEETKDLSKVS 226
           NGE ++DF SR A IVNQ++S G+ + ++ VV K+LRSL  KF+HVV  IEE+KDLS  S
Sbjct: 98  NGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYS 157

Query: 225 MYELIGSLEAHEERVNKYSDQPIEQVFQTKLNLSEKK 115
             EL+GSL++HE R+++  ++  E+ F TK   S++K
Sbjct: 158 FDELMGSLQSHEXRLSRTXEKNEEKTFYTKGETSDQK 194


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/90 (51%), Positives = 69/90 (76%)
 Frame = -3

Query: 399 EKIKDFFSRAAEIVNQIKSLGDVVPEKKVVQKILRSLPQKFEHVVTVIEETKDLSKVSMY 220
           EK+KD+FSR  EIVNQ++  G+ + ++KVV+KIL SLP+K+E++V  IEE+KDLS +++ 
Sbjct: 125 EKVKDYFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQ 184

Query: 219 ELIGSLEAHEERVNKYSDQPIEQVFQTKLN 130
           +L+ SLE+HEER  +     IE  FQ+KL+
Sbjct: 185 QLMSSLESHEERKLQREGSSIENAFQSKLS 214


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/97 (49%), Positives = 70/97 (72%)
 Frame = -3

Query: 405 NGEKIKDFFSRAAEIVNQIKSLGDVVPEKKVVQKILRSLPQKFEHVVTVIEETKDLSKVS 226
           NGE ++DF SR A IVNQ++S G+ + ++ VV K+LRSL  KF+HVV  IEE+KDLS  S
Sbjct: 125 NGESVQDFLSRVAAIVNQMRSYGEDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYS 184

Query: 225 MYELIGSLEAHEERVNKYSDQPIEQVFQTKLNLSEKK 115
             EL+GSL++HE R+++  ++  E+ F TK   S++K
Sbjct: 185 FDELMGSLQSHEVRLSRTEEKNEEKXFYTKGETSDQK 221


>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108708461|gb|ABF96256.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1167

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/90 (51%), Positives = 69/90 (76%)
 Frame = -3

Query: 399 EKIKDFFSRAAEIVNQIKSLGDVVPEKKVVQKILRSLPQKFEHVVTVIEETKDLSKVSMY 220
           EK+KD+FSR  EIVNQI+  G+ + ++KVV++IL SLP+K+E++V  IEE+KDLS +++ 
Sbjct: 125 EKVKDYFSRVIEIVNQIRLYGEDINDQKVVEEILISLPEKYEYIVAAIEESKDLSTLTIQ 184

Query: 219 ELIGSLEAHEERVNKYSDQPIEQVFQTKLN 130
           +L+ SLE+HEER  +     IE  FQ+KL+
Sbjct: 185 QLMSSLESHEERKLQREGSSIENAFQSKLS 214


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