BLASTX nr result

ID: Dioscorea21_contig00037164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037164
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29220.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_004145616.1| PREDICTED: carbon catabolite repressor prote...    77   1e-12
ref|XP_003568541.1| PREDICTED: carbon catabolite repressor prote...    76   3e-12
ref|NP_001055434.1| Os05g0389500 [Oryza sativa Japonica Group] g...    72   5e-11
ref|XP_004171083.1| PREDICTED: carbon catabolite repressor prote...    72   6e-11

>emb|CBI29220.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
 Frame = +1

Query: 55  ICSVVCKSKMSGSSKQISPKFISLE----DGGDITRCYKFRLVSYNILAQVYVKSSNFPG 222
           I S +  SKMS ++  I PKFIS+E    +   I   ++F LVSYNILAQVYVKSS FP 
Sbjct: 19  ISSRIRLSKMSTAAAPIIPKFISVEGVDINSRSIPDGFRFSLVSYNILAQVYVKSSLFPH 78

Query: 223 SPSSCLKWKVRSQAILT 273
           SPS CLKWK RSQAILT
Sbjct: 79  SPSPCLKWKARSQAILT 95


>ref|XP_004145616.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
           [Cucumis sativus]
          Length = 172

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/53 (73%), Positives = 42/53 (79%)
 Frame = +1

Query: 112 KFISLEDGGDITRCYKFRLVSYNILAQVYVKSSNFPGSPSSCLKWKVRSQAIL 270
           KFIS+E     +R  +FR VSYNILAQVYVKSS FP SPSSCLKWK RSQAIL
Sbjct: 11  KFISVEGADIYSRSIRFRFVSYNILAQVYVKSSFFPHSPSSCLKWKARSQAIL 63


>ref|XP_003568541.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
           [Brachypodium distachyon]
          Length = 391

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/78 (50%), Positives = 51/78 (65%)
 Frame = +1

Query: 40  CSFTFICSVVCKSKMSGSSKQISPKFISLEDGGDITRCYKFRLVSYNILAQVYVKSSNFP 219
           CS       +CK +MS  S + +P   +  +     + Y+FRLVSYNILAQVYVKS+ FP
Sbjct: 28  CSRRLSFRPICKRRMSTQSPRFAPLRTAQAESDAGAQGYRFRLVSYNILAQVYVKSAIFP 87

Query: 220 GSPSSCLKWKVRSQAILT 273
            SPS+ LKWK RS+A+LT
Sbjct: 88  HSPSASLKWKARSKAVLT 105


>ref|NP_001055434.1| Os05g0389500 [Oryza sativa Japonica Group]
           gi|48926650|gb|AAT47439.1| unknown protein, contains
           endonuclease/exonuclease/phosphatase family, PF03372
           [Oryza sativa Japonica Group]
           gi|113578985|dbj|BAF17348.1| Os05g0389500 [Oryza sativa
           Japonica Group] gi|215686379|dbj|BAG87640.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704387|dbj|BAG93821.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740790|dbj|BAG96946.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222631460|gb|EEE63592.1| hypothetical protein
           OsJ_18409 [Oryza sativa Japonica Group]
          Length = 389

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
 Frame = +1

Query: 67  VCKSKMSGSSKQISPKFISL------EDGGDITRCYKFRLVSYNILAQVYVKSSNFPGSP 228
           +CK +MS    Q  P F  L       D G     Y+FRLVSYNILAQVYVKS+ FP SP
Sbjct: 32  ICKRRMS---TQAQPSFAPLPTAQSESDAG--AAGYQFRLVSYNILAQVYVKSAFFPHSP 86

Query: 229 SSCLKWKVRSQAILT 273
           S+CLKWK RS+A+L+
Sbjct: 87  SACLKWKTRSKAVLS 101


>ref|XP_004171083.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
           [Cucumis sativus]
          Length = 394

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/57 (68%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
 Frame = +1

Query: 112 KFISLEDGGDITRC----YKFRLVSYNILAQVYVKSSNFPGSPSSCLKWKVRSQAIL 270
           KFIS+E     +R      +FR VSYNILAQVYVKSS FP SPSSCLKWK RSQAIL
Sbjct: 35  KFISVEGADIYSRSKSDGIRFRFVSYNILAQVYVKSSFFPHSPSSCLKWKARSQAIL 91


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