BLASTX nr result

ID: Dioscorea21_contig00037161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037161
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23583.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   141   6e-32
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   141   6e-32
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   130   1e-28
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   124   6e-27

>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/93 (73%), Positives = 80/93 (86%)
 Frame = -3

Query: 280 STKRSGEIGRLPTEWARCLIPLVSSSKVKVQGRCVLSVQQLSLMQEIVLYVSFYIHSSIF 101
           STKRSGEIGRLP EW +C+IPLV+SSKVKV GRCV +   L LMQEIVLYVSFYIH S+F
Sbjct: 384 STKRSGEIGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLYVSFYIHQSVF 443

Query: 100 TTGDKSSWKLVSASQLDSTIHPLPTLFKLLKIK 2
           T G+KSSW+L +A  +DST++PLPTLFKLL+IK
Sbjct: 444 TEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIK 476


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/93 (73%), Positives = 80/93 (86%)
 Frame = -3

Query: 280 STKRSGEIGRLPTEWARCLIPLVSSSKVKVQGRCVLSVQQLSLMQEIVLYVSFYIHSSIF 101
           STKRSGEIGRLP EW +C+IPLV+SSKVKV GRCV +   L LMQEIVLYVSFYIH S+F
Sbjct: 384 STKRSGEIGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLYVSFYIHQSVF 443

Query: 100 TTGDKSSWKLVSASQLDSTIHPLPTLFKLLKIK 2
           T G+KSSW+L +A  +DST++PLPTLFKLL+IK
Sbjct: 444 TEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIK 476


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/93 (73%), Positives = 80/93 (86%)
 Frame = -3

Query: 280 STKRSGEIGRLPTEWARCLIPLVSSSKVKVQGRCVLSVQQLSLMQEIVLYVSFYIHSSIF 101
           STKRSGEIGRLP EW +C+IPLV+SSKVKV GRCV +   L LMQEIVLYVSFYIH S+F
Sbjct: 384 STKRSGEIGRLPMEWTKCIIPLVNSSKVKVLGRCVAAPIILRLMQEIVLYVSFYIHQSVF 443

Query: 100 TTGDKSSWKLVSASQLDSTIHPLPTLFKLLKIK 2
           T G+KSSW+L +A  +DST++PLPTLFKLL+IK
Sbjct: 444 TEGNKSSWRLDAAPNIDSTVYPLPTLFKLLQIK 476


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/92 (68%), Positives = 76/92 (82%)
 Frame = -3

Query: 280 STKRSGEIGRLPTEWARCLIPLVSSSKVKVQGRCVLSVQQLSLMQEIVLYVSFYIHSSIF 101
           STKRSGEIGRLP EW +C++PLV+S+KVK  GRC+ +   L +MQEI+LYVSFYIHSSIF
Sbjct: 233 STKRSGEIGRLPMEWGKCVVPLVNSNKVKFLGRCIAAPPTLHIMQEIMLYVSFYIHSSIF 292

Query: 100 TTGDKSSWKLVSASQLDSTIHPLPTLFKLLKI 5
           T  DKS+W+L + S  DSTI+PL TLFKLLKI
Sbjct: 293 TELDKSTWRLEAHSNADSTIYPLLTLFKLLKI 324


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = -3

Query: 280 STKRSGEIGRLPTEWARCLIPLVSSSKVKVQGRCVLSVQQLSLMQEIVLYVSFYIHSSIF 101
           STKRSGEIGRLP EWA+C++PLV+S KVK+ GRC+ +   L +MQEI+LYVSFYIH+S+F
Sbjct: 280 STKRSGEIGRLPMEWAKCVVPLVNSQKVKILGRCIAAPGNLHIMQEILLYVSFYIHNSVF 339

Query: 100 TTGDKSSWKLVSASQLDSTIHPLPTLFKLLKI 5
           +  D  +WKL  A+ +DSTI+PL TLFKLLKI
Sbjct: 340 SDIDTVTWKL-EATHIDSTIYPLLTLFKLLKI 370


Top