BLASTX nr result

ID: Dioscorea21_contig00037143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037143
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea ...    90   2e-16
gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionem...    90   2e-16
ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabi...    89   3e-16
gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium ...    89   3e-16

>gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
          Length = 588

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/65 (63%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   DDATFIAILSACGHSGLVKEGLEMFDIMRSLYKIEPRAEHYGCVVDFLSRAGQFEQAMEL 181
           DD TF+ IL+AC HSGLVKEGL  F++MR  +KIEPR +HYGC+VD LSR+G  E A  L
Sbjct: 425 DDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNL 484

Query: 182 IARMP 196
           I  MP
Sbjct: 485 IEEMP 489


>gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
          Length = 587

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/65 (63%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   DDATFIAILSACGHSGLVKEGLEMFDIMRSLYKIEPRAEHYGCVVDFLSRAGQFEQAMEL 181
           DD TFI +L+AC HSGLVKEGL  F++MR  +KIEPR +HYGC+VD LSR+G  E A  L
Sbjct: 428 DDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSIELAKHL 487

Query: 182 IARMP 196
           I  MP
Sbjct: 488 IEDMP 492


>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   DDATFIAILSACGHSGLVKEGLEMFDIMRSLYKIEPRAEHYGCVVDFLSRAGQFEQAMEL 181
           +D TF+AILSAC H+G+V EG ++ D M S Y IEP+ EHYGCV+D L+RAG  E+AMEL
Sbjct: 489 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL 548

Query: 182 IARMP 196
           I  MP
Sbjct: 549 IGTMP 553


>gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
          Length = 579

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/65 (61%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   DDATFIAILSACGHSGLVKEGLEMFDIMRSLYKIEPRAEHYGCVVDFLSRAGQFEQAMEL 181
           DD TF+ +L+AC HSGLVKEGL  F++MR  +KIEPR +HYGC+VD LSR+G  E A  L
Sbjct: 416 DDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNL 475

Query: 182 IARMP 196
           I  MP
Sbjct: 476 IEEMP 480


>gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
          Length = 597

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   DDATFIAILSACGHSGLVKEGLEMFDIMRSLYKIEPRAEHYGCVVDFLSRAGQFEQAMEL 181
           DD TFI +L+AC HSGLVKEGL  F++MR  +KIEPR +HYGC+VD LSR+G  E A  L
Sbjct: 434 DDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKIL 493

Query: 182 IARMP 196
           I +MP
Sbjct: 494 IEKMP 498


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