BLASTX nr result

ID: Dioscorea21_contig00037133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037133
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]                 141   5e-32
gb|ABG37655.1| integrase [Populus trichocarpa]                        141   5e-32
ref|XP_003605924.1| TdcA1-ORF2 protein [Medicago truncatula] gi|...   131   5e-29
emb|CAM59133.1| putative transposase [Antirrhinum majus]              127   7e-28
gb|ABM55245.1| transposon-like protein [Beta vulgaris]                127   7e-28

>gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]
          Length = 654

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/86 (70%), Positives = 73/86 (84%)
 Frame = +2

Query: 2   DCHVFMQRLLPIAFRGLLPNSIWDVITELSHFFRDICSTEVRVVHMEVLEKNIVETLCKM 181
           DCHVFMQ L+P+AFR LLP  IWD +TE++HFFRDICS ++ V H+E ++ NIVETLCK+
Sbjct: 451 DCHVFMQTLIPLAFRDLLPKGIWDALTEINHFFRDICSNKLNVDHIERIQTNIVETLCKL 510

Query: 182 EKIFPPGFFDSMEHLPIHLPYEAKVG 259
           E IFPP FFDSMEHLPIHLP+EAK G
Sbjct: 511 EMIFPPSFFDSMEHLPIHLPFEAKAG 536


>gb|ABG37655.1| integrase [Populus trichocarpa]
          Length = 1263

 Score =  141 bits (356), Expect = 5e-32
 Identities = 62/86 (72%), Positives = 74/86 (86%)
 Frame = +2

Query: 2   DCHVFMQRLLPIAFRGLLPNSIWDVITELSHFFRDICSTEVRVVHMEVLEKNIVETLCKM 181
           DCHVFMQ L+P+AFR LLP  IWD +TE+SHFFRDICS+++ V H+E L+ NIV+TLCK+
Sbjct: 279 DCHVFMQTLIPLAFRDLLPKGIWDALTEISHFFRDICSSKLNVDHIERLQTNIVKTLCKL 338

Query: 182 EKIFPPGFFDSMEHLPIHLPYEAKVG 259
           E IFPP FFDSMEHLPIHLP+EAK G
Sbjct: 339 EIIFPPSFFDSMEHLPIHLPFEAKAG 364


>ref|XP_003605924.1| TdcA1-ORF2 protein [Medicago truncatula]
           gi|355506979|gb|AES88121.1| TdcA1-ORF2 protein [Medicago
           truncatula]
          Length = 1066

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/86 (72%), Positives = 70/86 (81%)
 Frame = +2

Query: 2   DCHVFMQRLLPIAFRGLLPNSIWDVITELSHFFRDICSTEVRVVHMEVLEKNIVETLCKM 181
           DCHVFM+RLLPIAF  L P+  W  ITELS FFRD+CST VRV  +  LEKNI   +CK+
Sbjct: 193 DCHVFMERLLPIAFSSL-PDQTWKAITELSQFFRDLCSTSVRVDDLISLEKNIPTVVCKL 251

Query: 182 EKIFPPGFFDSMEHLPIHLPYEAKVG 259
           E+IFPPGFFDSMEHLPIHLPYEA+VG
Sbjct: 252 ERIFPPGFFDSMEHLPIHLPYEARVG 277


>emb|CAM59133.1| putative transposase [Antirrhinum majus]
          Length = 919

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/86 (66%), Positives = 70/86 (81%)
 Frame = +2

Query: 2   DCHVFMQRLLPIAFRGLLPNSIWDVITELSHFFRDICSTEVRVVHMEVLEKNIVETLCKM 181
           DCHVFMQRL+P AF   LP+S+W  + E+S+FFR +C+TE+R   MEVL+  IV T+CK+
Sbjct: 565 DCHVFMQRLMPNAFHDFLPDSVWGPLVEVSNFFRALCATELRKSDMEVLQSTIVVTMCKL 624

Query: 182 EKIFPPGFFDSMEHLPIHLPYEAKVG 259
           EKIFPP FFDSMEHL IHLP+EAKVG
Sbjct: 625 EKIFPPSFFDSMEHLAIHLPWEAKVG 650


>gb|ABM55245.1| transposon-like protein [Beta vulgaris]
          Length = 1399

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/86 (63%), Positives = 69/86 (80%)
 Frame = +2

Query: 2   DCHVFMQRLLPIAFRGLLPNSIWDVITELSHFFRDICSTEVRVVHMEVLEKNIVETLCKM 181
           DCHVFM+RLLP+  + LLP  +W  ITE+S FFRD+C++ ++V  M+ LE NI E LCK+
Sbjct: 546 DCHVFMERLLPVGLKELLPLHVWKAITEISQFFRDLCASTIKVSEMKRLENNIAEILCKL 605

Query: 182 EKIFPPGFFDSMEHLPIHLPYEAKVG 259
           EKIFP  FF+SMEHLP+HLPYEAKVG
Sbjct: 606 EKIFPSSFFNSMEHLPVHLPYEAKVG 631


Top