BLASTX nr result

ID: Dioscorea21_contig00037106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037106
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885884.1| abc transporter family protein [Arabidopsis ...   157   1e-36
ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5...   156   1e-36
ref|NP_178984.1| ABC transporter G family member 5 [Arabidopsis ...   156   2e-36
ref|XP_002309921.1| white-brown-complex ABC transporter family [...   155   3e-36
ref|XP_002516304.1| ATP-binding cassette transporter, putative [...   155   4e-36

>ref|XP_002885884.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331724|gb|EFH62143.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 649

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/114 (65%), Positives = 84/114 (73%)
 Frame = +3

Query: 3   YVVANXXXXXXXXXXXXXXXXXXXYVMVGLNKSLKAFAYFLLLIWLILYTANSVVVCFSA 182
           Y +AN                   Y +VGLN +  AF +FLLLIWLILYTANSVVVCFSA
Sbjct: 465 YAIANGLVYLPFLLILAILFSLPVYWLVGLNPNFMAFLHFLLLIWLILYTANSVVVCFSA 524

Query: 183 LAPNFIVGNSVISGVLGSFFLFSGYFIRKTEMPGYWVFMHYVSLFKYPFEGLLV 344
           L PNFIVGNSVISGV+GSFFLFSGYFI   E+PGYW+FMHY+SLFKYPFEG L+
Sbjct: 525 LVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLI 578


>ref|XP_003525127.1| PREDICTED: ABC transporter G family member 5-like [Glycine max]
          Length = 649

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/114 (64%), Positives = 85/114 (74%)
 Frame = +3

Query: 3   YVVANXXXXXXXXXXXXXXXXXXXYVMVGLNKSLKAFAYFLLLIWLILYTANSVVVCFSA 182
           Y +AN                   Y +VGLN++  AF +FLLLIWLILYTANSVVVCFSA
Sbjct: 463 YAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSA 522

Query: 183 LAPNFIVGNSVISGVLGSFFLFSGYFIRKTEMPGYWVFMHYVSLFKYPFEGLLV 344
           L PNFIVGNSVI+GV+GSFFLFSGYFI K E+P YW+FMHY+SLFKYPFEG L+
Sbjct: 523 LVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLI 576


>ref|NP_178984.1| ABC transporter G family member 5 [Arabidopsis thaliana]
           gi|75337284|sp|Q9SIT6.1|AB5G_ARATH RecName: Full=ABC
           transporter G family member 5; Short=ABC transporter
           ABCG.5; Short=AtABCG5; AltName: Full=White-brown complex
           homolog protein 5; Short=AtWBC5
           gi|4558665|gb|AAD22683.1| putative ABC transporter
           [Arabidopsis thaliana] gi|14532696|gb|AAK64149.1|
           putative ABC transporter protein [Arabidopsis thaliana]
           gi|22136942|gb|AAM91815.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|330251151|gb|AEC06245.1| ABC transporter G family
           member 5 [Arabidopsis thaliana]
          Length = 649

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/114 (66%), Positives = 83/114 (72%)
 Frame = +3

Query: 3   YVVANXXXXXXXXXXXXXXXXXXXYVMVGLNKSLKAFAYFLLLIWLILYTANSVVVCFSA 182
           Y VAN                   Y +VGLN S  AF +F LLIWLILYTANSVVVCFSA
Sbjct: 465 YAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSA 524

Query: 183 LAPNFIVGNSVISGVLGSFFLFSGYFIRKTEMPGYWVFMHYVSLFKYPFEGLLV 344
           L PNFIVGNSVISGV+GSFFLFSGYFI   E+PGYW+FMHY+SLFKYPFEG L+
Sbjct: 525 LVPNFIVGNSVISGVMGSFFLFSGYFISNHEIPGYWIFMHYISLFKYPFEGFLI 578


>ref|XP_002309921.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222852824|gb|EEE90371.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 546

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/114 (65%), Positives = 83/114 (72%)
 Frame = +3

Query: 3   YVVANXXXXXXXXXXXXXXXXXXXYVMVGLNKSLKAFAYFLLLIWLILYTANSVVVCFSA 182
           Y +AN                   Y +VGLN +  AF +FLLLIWLILYTANSVVVCFSA
Sbjct: 373 YAIANGLVYLPFLLILAILFTIPLYWLVGLNPNFMAFMHFLLLIWLILYTANSVVVCFSA 432

Query: 183 LAPNFIVGNSVISGVLGSFFLFSGYFIRKTEMPGYWVFMHYVSLFKYPFEGLLV 344
           L PNFIVGNSVISGV+GSFFLFSGYFI K  MP YW+FMHY+SLFKYPFEG L+
Sbjct: 433 LVPNFIVGNSVISGVMGSFFLFSGYFISKHGMPNYWIFMHYISLFKYPFEGFLI 486


>ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544534|gb|EEF46051.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 600

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/114 (64%), Positives = 84/114 (73%)
 Frame = +3

Query: 3   YVVANXXXXXXXXXXXXXXXXXXXYVMVGLNKSLKAFAYFLLLIWLILYTANSVVVCFSA 182
           Y +AN                   Y +VGLN S+ AF +FLLLIW+ILYTANSVVVCFSA
Sbjct: 447 YAIANGLVYLPFLLILAILFSVPLYWLVGLNPSVSAFMHFLLLIWMILYTANSVVVCFSA 506

Query: 183 LAPNFIVGNSVISGVLGSFFLFSGYFIRKTEMPGYWVFMHYVSLFKYPFEGLLV 344
           L PNFIVGNSVISGV+GSFFLFSGYFI K  +P YW+FMHY+SLFKYPFEG L+
Sbjct: 507 LVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPNYWIFMHYISLFKYPFEGFLI 560


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