BLASTX nr result
ID: Dioscorea21_contig00037100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00037100 (605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 214 9e-54 emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 201 1e-49 emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 195 6e-48 gb|ABW74566.1| integrase [Boechera divaricarpa] 186 2e-45 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 176 4e-42 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 214 bits (545), Expect = 9e-54 Identities = 97/196 (49%), Positives = 138/196 (70%) Frame = +3 Query: 6 VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185 +QC +CKKFGH + +CW ++K +K+A+ +E S LFMASS + ++ VW +DSGC Sbjct: 258 IQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGC 317 Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365 SNHM+ +SLF LDE++K VRLG+DK++ +EG GTV I T G+VK L VQYVP LA Sbjct: 318 SNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLA 377 Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545 HNLLSVGQL++ GYSV+F ++C I D S + + ++ ++N MFP+D+SN+G + V Sbjct: 378 HNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVK 437 Query: 546 SQSLSELWHHRLGHLN 593 ++ + LWH R GHLN Sbjct: 438 EKNETNLWHLRYGHLN 453 >emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] Length = 1109 Score = 201 bits (510), Expect = 1e-49 Identities = 92/200 (46%), Positives = 140/200 (70%) Frame = +3 Query: 6 VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185 +QC++CK+FGHV+A CW +E+Q EK+A+ V +E++ LFMA + S+ +W +DSGC Sbjct: 240 IQCYYCKRFGHVQAECWKKERQ-EKQANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGC 298 Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365 SNHMTG +SLF LDE+ K+ V+LG+DK++ VEG GTV+++ G+VK L V ++P L Sbjct: 299 SNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLT 358 Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545 NLLSVGQL+ GYS++F+ +CVI D + ++ ++ + N +FP++VS+I + + V Sbjct: 359 QNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIEKHALVVK 418 Query: 546 SQSLSELWHHRLGHLNYRSM 605 S S LWH R GHLN + + Sbjct: 419 ETSESNLWHLRYGHLNVKGL 438 >emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] Length = 1274 Score = 195 bits (495), Expect = 6e-48 Identities = 89/200 (44%), Positives = 138/200 (69%) Frame = +3 Query: 6 VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185 +QC++CK+FGHV+ CW +E+Q EK+A+ V +E++ LFM + S+ +W +DSGC Sbjct: 254 IQCYYCKRFGHVQXECWKKERQ-EKQANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGC 312 Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365 SNHMTG +SLF LDE+ K+ V+LG+DK++ VEG G ++++ G+VK L V ++P L Sbjct: 313 SNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLT 372 Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545 NLLSVGQL+ GYS++F+ +CVI D S + ++ ++ + N +FP++VS+I + + V Sbjct: 373 QNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVK 432 Query: 546 SQSLSELWHHRLGHLNYRSM 605 S S LWH R GHLN + + Sbjct: 433 ETSESNLWHLRYGHLNVKGL 452 >gb|ABW74566.1| integrase [Boechera divaricarpa] Length = 1165 Score = 186 bits (473), Expect = 2e-45 Identities = 88/196 (44%), Positives = 131/196 (66%) Frame = +3 Query: 6 VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185 +QC +CKK+GH++ NCW ++K+ EK A V +E E LFMA S + S VW +DSGC Sbjct: 96 IQCHYCKKYGHMQTNCWKKQKE-EKHACFVEQENEQPRLFMAFES-EEASKSVWYLDSGC 153 Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365 SNHMTG +S F LDE+ K+ V+LGNDKE+ VEG G V++ G++K + GV Y+P LA Sbjct: 154 SNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLA 213 Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545 HNLLSVGQ++ SV+F+ + CVI + S + ++K+ NN++P+++S++ + Sbjct: 214 HNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAK 273 Query: 546 SQSLSELWHHRLGHLN 593 +S+L H R GHL+ Sbjct: 274 VSDISKLLHLRYGHLH 289 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 176 bits (445), Expect = 4e-42 Identities = 84/191 (43%), Positives = 128/191 (67%) Frame = +3 Query: 33 GHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGCSNHMTGDRS 212 G + CW +E+Q EK+A+ V +E++ LFMA + S+ +W +DSGCSNHMTG +S Sbjct: 248 GDAQXECWKKERQ-EKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKS 306 Query: 213 LFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLAHNLLSVGQL 392 LF LDE+ K+ V+LG+DK++ VEG GT +++ G+VK L V ++P L NLLSVGQL Sbjct: 307 LFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQL 366 Query: 393 ISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVSSQSLSELWH 572 + GYS++F+ +CVI D S + ++ ++ + N +FP++VS+I + + V S S LWH Sbjct: 367 MVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 426 Query: 573 HRLGHLNYRSM 605 R GHLN + + Sbjct: 427 LRYGHLNVKGL 437