BLASTX nr result

ID: Dioscorea21_contig00037100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037100
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   214   9e-54
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   201   1e-49
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   195   6e-48
gb|ABW74566.1| integrase [Boechera divaricarpa]                       186   2e-45
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   176   4e-42

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  214 bits (545), Expect = 9e-54
 Identities = 97/196 (49%), Positives = 138/196 (70%)
 Frame = +3

Query: 6   VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185
           +QC +CKKFGH + +CW ++K  +K+A+     +E S LFMASS +   ++ VW +DSGC
Sbjct: 258 IQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMASSQITESANAVWFIDSGC 317

Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365
           SNHM+  +SLF  LDE++K  VRLG+DK++ +EG GTV I T  G+VK L  VQYVP LA
Sbjct: 318 SNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLA 377

Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545
           HNLLSVGQL++ GYSV+F  ++C I D  S + + ++  ++N MFP+D+SN+G   + V 
Sbjct: 378 HNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQNKMFPLDISNVGNSALVVK 437

Query: 546 SQSLSELWHHRLGHLN 593
            ++ + LWH R GHLN
Sbjct: 438 EKNETNLWHLRYGHLN 453


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  201 bits (510), Expect = 1e-49
 Identities = 92/200 (46%), Positives = 140/200 (70%)
 Frame = +3

Query: 6   VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185
           +QC++CK+FGHV+A CW +E+Q EK+A+ V +E++   LFMA +     S+ +W +DSGC
Sbjct: 240 IQCYYCKRFGHVQAECWKKERQ-EKQANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGC 298

Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365
           SNHMTG +SLF  LDE+ K+ V+LG+DK++ VEG GTV+++   G+VK L  V ++P L 
Sbjct: 299 SNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLT 358

Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545
            NLLSVGQL+  GYS++F+  +CVI D    + ++ ++ + N +FP++VS+I +  + V 
Sbjct: 359 QNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKLFPLEVSSIEKHALVVK 418

Query: 546 SQSLSELWHHRLGHLNYRSM 605
             S S LWH R GHLN + +
Sbjct: 419 ETSESNLWHLRYGHLNVKGL 438


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  195 bits (495), Expect = 6e-48
 Identities = 89/200 (44%), Positives = 138/200 (69%)
 Frame = +3

Query: 6   VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185
           +QC++CK+FGHV+  CW +E+Q EK+A+ V +E++   LFM  +     S+ +W +DSGC
Sbjct: 254 IQCYYCKRFGHVQXECWKKERQ-EKQANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGC 312

Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365
           SNHMTG +SLF  LDE+ K+ V+LG+DK++ VEG G ++++   G+VK L  V ++P L 
Sbjct: 313 SNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLT 372

Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545
            NLLSVGQL+  GYS++F+  +CVI D  S + ++ ++ + N +FP++VS+I +  + V 
Sbjct: 373 QNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKLFPLEVSSIEKHALVVK 432

Query: 546 SQSLSELWHHRLGHLNYRSM 605
             S S LWH R GHLN + +
Sbjct: 433 ETSESNLWHLRYGHLNVKGL 452


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  186 bits (473), Expect = 2e-45
 Identities = 88/196 (44%), Positives = 131/196 (66%)
 Frame = +3

Query: 6   VQCFHCKKFGHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGC 185
           +QC +CKK+GH++ NCW ++K+ EK A  V +E E   LFMA  S +  S  VW +DSGC
Sbjct: 96  IQCHYCKKYGHMQTNCWKKQKE-EKHACFVEQENEQPRLFMAFES-EEASKSVWYLDSGC 153

Query: 186 SNHMTGDRSLFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLA 365
           SNHMTG +S F  LDE+ K+ V+LGNDKE+ VEG G V++    G++K + GV Y+P LA
Sbjct: 154 SNHMTGTKSSFKELDESHKLKVKLGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLA 213

Query: 366 HNLLSVGQLISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVS 545
           HNLLSVGQ++    SV+F+ + CVI +  S   +  ++K+ NN++P+++S++    +   
Sbjct: 214 HNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTSNNLYPLEMSSVETKALVAK 273

Query: 546 SQSLSELWHHRLGHLN 593
              +S+L H R GHL+
Sbjct: 274 VSDISKLLHLRYGHLH 289


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  176 bits (445), Expect = 4e-42
 Identities = 84/191 (43%), Positives = 128/191 (67%)
 Frame = +3

Query: 33  GHVKANCWAREKQPEKEASMVAEEKETSNLFMASSSLDPYSSQVWLVDSGCSNHMTGDRS 212
           G  +  CW +E+Q EK+A+ V +E++   LFMA +     S+ +W +DSGCSNHMTG +S
Sbjct: 248 GDAQXECWKKERQ-EKQANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKS 306

Query: 213 LFVSLDEARKVSVRLGNDKEMIVEGVGTVSISTQAGDVKQLQGVQYVPGLAHNLLSVGQL 392
           LF  LDE+ K+ V+LG+DK++ VEG GT +++   G+VK L  V ++P L  NLLSVGQL
Sbjct: 307 LFKELDESHKLKVKLGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQL 366

Query: 393 ISKGYSVIFNHDSCVISDNHSKKQVLKIQKSRNNMFPVDVSNIGRLNVAVSSQSLSELWH 572
           +  GYS++F+  +CVI D  S + ++ ++ + N +FP++VS+I +  + V   S S LWH
Sbjct: 367 MVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKLFPLEVSSIEKHALVVKETSESNLWH 426

Query: 573 HRLGHLNYRSM 605
            R GHLN + +
Sbjct: 427 LRYGHLNVKGL 437


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