BLASTX nr result

ID: Dioscorea21_contig00037051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037051
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...   211   6e-53
gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]        207   7e-52
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45

>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/136 (76%), Positives = 121/136 (88%)
 Frame = +3

Query: 3   FIRRMPIEPNAVIWRTLLSSCKIHKNVEFAEESLKQLVKLDPGHSGDYILLSSIYASVGR 182
           FI+ MPI+PNAVIWRTLL+SCK+HKNVE  EESLKQL+ L+P HSGDYILLS+IYASVGR
Sbjct: 485 FIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGR 544

Query: 183 WEDAVIVRNQMKEKGIKKTPGCSLIEMDGMIHEFFAEDSAHPLSKEIYEKIEEMVSKIKL 362
           WEDA+ VR +MKEKGIKKTPGCSLIE+DG+IHEFFAED+ H  S+EIY  IE+M+ +IK 
Sbjct: 545 WEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKS 604

Query: 363 AGYVPNLADARLDAEE 410
           AGYVPN A+ARLDAEE
Sbjct: 605 AGYVPNTAEARLDAEE 620


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  211 bits (536), Expect = 6e-53
 Identities = 94/136 (69%), Positives = 119/136 (87%)
 Frame = +3

Query: 3   FIRRMPIEPNAVIWRTLLSSCKIHKNVEFAEESLKQLVKLDPGHSGDYILLSSIYASVGR 182
           FIR MPIEPNAVIWR LLSSC +HKNVE  EE+LKQ+V L+P HSGDYILLS+IYASVG+
Sbjct: 480 FIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQ 539

Query: 183 WEDAVIVRNQMKEKGIKKTPGCSLIEMDGMIHEFFAEDSAHPLSKEIYEKIEEMVSKIKL 362
           W++A ++R +MK++GI+KTPGCSLIE+DG++ EFFAEDS HP  KEIY+K+EEM+ +IK+
Sbjct: 540 WKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKM 599

Query: 363 AGYVPNLADARLDAEE 410
           AGY+PN AD RL+ +E
Sbjct: 600 AGYIPNTADVRLEVDE 615


>gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  207 bits (527), Expect = 7e-52
 Identities = 92/136 (67%), Positives = 117/136 (86%)
 Frame = +3

Query: 3   FIRRMPIEPNAVIWRTLLSSCKIHKNVEFAEESLKQLVKLDPGHSGDYILLSSIYASVGR 182
           FIR MPIEPNAVIWR LLSSC +H+NV   EE+LKQ++ L+P HSGDY+LLS+IYAS G+
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540

Query: 183 WEDAVIVRNQMKEKGIKKTPGCSLIEMDGMIHEFFAEDSAHPLSKEIYEKIEEMVSKIKL 362
           W+DA +VR +MK++GI+KTPGCSLIE+DG++ EFFAEDS HP  +EIY+K+EEM+ +IK+
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKV 600

Query: 363 AGYVPNLADARLDAEE 410
           AGYVPN AD RL+ EE
Sbjct: 601 AGYVPNTADVRLEVEE 616


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  203 bits (516), Expect = 1e-50
 Identities = 92/136 (67%), Positives = 113/136 (83%)
 Frame = +3

Query: 3   FIRRMPIEPNAVIWRTLLSSCKIHKNVEFAEESLKQLVKLDPGHSGDYILLSSIYASVGR 182
           FIR MPIEPNAV+WR LLS+C +HKNVE  EE+LKQ+V LDP HSG+YILLS+ YASVG+
Sbjct: 532 FIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQ 591

Query: 183 WEDAVIVRNQMKEKGIKKTPGCSLIEMDGMIHEFFAEDSAHPLSKEIYEKIEEMVSKIKL 362
           W++A +VR +MKEKG++K PGCSLIE++G I EFFAEDS HP   EIYEK+ EM+  IK+
Sbjct: 592 WKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKM 651

Query: 363 AGYVPNLADARLDAEE 410
            GY+PN ADARLD +E
Sbjct: 652 VGYIPNTADARLDVDE 667


>ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449524140|ref|XP_004169081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  184 bits (466), Expect = 8e-45
 Identities = 85/136 (62%), Positives = 110/136 (80%)
 Frame = +3

Query: 3   FIRRMPIEPNAVIWRTLLSSCKIHKNVEFAEESLKQLVKLDPGHSGDYILLSSIYASVGR 182
           FI  MP  PNAV+WRTLL+SC+ HKN+E AE+SL+ + +L+P HSGDYILLS+ YA VGR
Sbjct: 482 FIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGR 541

Query: 183 WEDAVIVRNQMKEKGIKKTPGCSLIEMDGMIHEFFAEDSAHPLSKEIYEKIEEMVSKIKL 362
            EDA+ VR+ +KEK IKK PGCSLIE+DG++HEFF+ED  H  SKEI++ +++M+ +IK 
Sbjct: 542 VEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKR 601

Query: 363 AGYVPNLADARLDAEE 410
            GYVPN  DARL+AEE
Sbjct: 602 LGYVPNTDDARLEAEE 617


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