BLASTX nr result

ID: Dioscorea21_contig00037024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037024
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group] g...   115   1e-23
emb|CBI26162.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002465228.1| hypothetical protein SORBIDRAFT_01g034600 [S...   107   2e-21
ref|XP_003561611.1| PREDICTED: pentatricopeptide repeat-containi...   105   1e-20
ref|NP_001147294.1| transferase, transferring glycosyl groups [Z...    92   1e-16

>ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
           gi|108708311|gb|ABF96106.1| pentatricopeptide, putative
           [Oryza sativa Japonica Group]
           gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa
           Japonica Group]
          Length = 564

 Score =  115 bits (287), Expect = 1e-23
 Identities = 64/137 (46%), Positives = 81/137 (59%)
 Frame = +3

Query: 3   VSTYTPIIRALCEEGSMADAVTMMTDMVEVRGLEPLVRTYDYIIVGFCKLGEAREALSWF 182
           VST+TP+I  +CEEG + DA   +  ++  +GLEPL R  D II GFCK     + ++W 
Sbjct: 430 VSTFTPLIDTMCEEGQV-DAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWL 488

Query: 183 LRMMKGKLKPRNDTLILLVECLSSVGQVDDALFVSNSMLELGYSLGGSACHQLVSALCCK 362
             M+K  LKPR  T   LVE LSS G+VDDAL V N+M ++G+ LG  AC  LV  LC  
Sbjct: 489 AGMLKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLC-- 546

Query: 363 TDKHTTKEWLEEIKVGN 413
           T K      LE I V N
Sbjct: 547 TGKLCYSHELENILVAN 563


>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/119 (43%), Positives = 80/119 (67%)
 Frame = +3

Query: 6   STYTPIIRALCEEGSMADAVTMMTDMVEVRGLEPLVRTYDYIIVGFCKLGEAREALSWFL 185
           ++Y P+I  LC+EG M +A  +  DM + RG+EP V T+D++I GFCK G A E + W  
Sbjct: 508 ASYAPLIDKLCQEGDMQNAKILWDDM-QNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLT 566

Query: 186 RMMKGKLKPRNDTLILLVECLSSVGQVDDALFVSNSMLELGYSLGGSACHQLVSALCCK 362
            M++ KL+P+  +   L++CLS + ++DDAL V +SML++G+ L  S C+ LV+ LC K
Sbjct: 567 TMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEK 625


>ref|XP_002465228.1| hypothetical protein SORBIDRAFT_01g034600 [Sorghum bicolor]
           gi|241919082|gb|EER92226.1| hypothetical protein
           SORBIDRAFT_01g034600 [Sorghum bicolor]
          Length = 557

 Score =  107 bits (268), Expect = 2e-21
 Identities = 54/118 (45%), Positives = 78/118 (66%)
 Frame = +3

Query: 3   VSTYTPIIRALCEEGSMADAVTMMTDMVEVRGLEPLVRTYDYIIVGFCKLGEAREALSWF 182
           VST++P+I A+CE G +  AV ++ +++  +GLEPLV + D II GFCK+  + E ++W 
Sbjct: 423 VSTFSPLIGAMCENGQVHAAVDLI-NLMRAKGLEPLVWSNDRIINGFCKINRSDEGMAWL 481

Query: 183 LRMMKGKLKPRNDTLILLVECLSSVGQVDDALFVSNSMLELGYSLGGSACHQLVSALC 356
             M+K  +KPR  T   LVE LS+ G++DDAL V N M ++G+ LG  AC  LV  LC
Sbjct: 482 AGMLKDNIKPRKQTFDYLVESLSTCGRLDDALLVLNIMFKVGFGLGRFACTILVDKLC 539


>ref|XP_003561611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Brachypodium distachyon]
          Length = 547

 Score =  105 bits (261), Expect = 1e-20
 Identities = 57/137 (41%), Positives = 84/137 (61%)
 Frame = +3

Query: 3   VSTYTPIIRALCEEGSMADAVTMMTDMVEVRGLEPLVRTYDYIIVGFCKLGEAREALSWF 182
           VST+TP+I  +CEEG +  AV +   +++ +G EPLVR+ D +I GFCK   A +A++W 
Sbjct: 414 VSTFTPLIDTMCEEGQVDHAVELFR-LMQAKGFEPLVRSNDSVINGFCKARRADDAMAWL 472

Query: 183 LRMMKGKLKPRNDTLILLVECLSSVGQVDDALFVSNSMLELGYSLGGSACHQLVSALCCK 362
             M+K  LKP+  T   L+E LS+  +VDDAL + N+ML+ G+ L    C  LV  LC  
Sbjct: 473 AGMLKSNLKPQKQTFNSLLELLSTSERVDDALLILNTMLKSGFGLDSLPCTILVDKLCTG 532

Query: 363 TDKHTTKEWLEEIKVGN 413
              ++ K  LE+I V +
Sbjct: 533 NVPYSHK--LEDILVSS 547


>ref|NP_001147294.1| transferase, transferring glycosyl groups [Zea mays]
           gi|195609598|gb|ACG26629.1| transferase, transferring
           glycosyl groups [Zea mays] gi|414866930|tpg|DAA45487.1|
           TPA: hypothetical protein ZEAMMB73_715808 [Zea mays]
          Length = 546

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 47/117 (40%), Positives = 70/117 (59%)
 Frame = +3

Query: 6   STYTPIIRALCEEGSMADAVTMMTDMVEVRGLEPLVRTYDYIIVGFCKLGEAREALSWFL 185
           ST+  +I A+CE G +  AV ++  M   +GLEP V T D+II GFCK+  + E ++W  
Sbjct: 420 STFGRLICAMCENGQVHAAVDLIKSM-RTKGLEPPVWTNDHIISGFCKINLSDEGMAWLA 478

Query: 186 RMMKGKLKPRNDTLILLVECLSSVGQVDDALFVSNSMLELGYSLGGSACHQLVSALC 356
            M+K  ++P+  T   LVE LS+ G++DD L V N M ++G+ +G  AC  L    C
Sbjct: 479 GMLKDNIRPQRQTFDYLVESLSTSGRLDDVLLVLNIMFKVGFEIGTFACTVLAEKPC 535


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