BLASTX nr result

ID: Dioscorea21_contig00037009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00037009
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279892.1| PREDICTED: uncharacterized protein LOC100256...    59   4e-07
emb|CAN65610.1| hypothetical protein VITISV_006634 [Vitis vinifera]    59   4e-07
ref|XP_002514165.1| protein with unknown function [Ricinus commu...    56   3e-06

>ref|XP_002279892.1| PREDICTED: uncharacterized protein LOC100256064 [Vitis vinifera]
            gi|297738702|emb|CBI27947.3| unnamed protein product
            [Vitis vinifera]
          Length = 1179

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +1

Query: 55   SEASKIPSRESSFKSVSHVHPKLPDYDTIVAHFQALRANRQ 177
            S +++ PSRE+S K  SHVHPKLPDY+++ A FQ+LR NRQ
Sbjct: 1139 SSSTEPPSRENSIKKASHVHPKLPDYESLAARFQSLRVNRQ 1179


>emb|CAN65610.1| hypothetical protein VITISV_006634 [Vitis vinifera]
          Length = 600

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +1

Query: 55  SEASKIPSRESSFKSVSHVHPKLPDYDTIVAHFQALRANRQ 177
           S +++ PSRE+S K  SHVHPKLPDY+++ A FQ+LR NRQ
Sbjct: 560 SSSTEPPSRENSIKKASHVHPKLPDYESLAARFQSLRVNRQ 600


>ref|XP_002514165.1| protein with unknown function [Ricinus communis]
            gi|223546621|gb|EEF48119.1| protein with unknown function
            [Ricinus communis]
          Length = 1155

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 31/52 (59%)
 Frame = +1

Query: 22   RKENLHKTQVYSEASKIPSRESSFKSVSHVHPKLPDYDTIVAHFQALRANRQ 177
            R      T+  S  +  PSRE+S    SHVHPKLPDYD + AH  +LR NRQ
Sbjct: 1104 RTGGAESTKTSSSPADPPSRENSINKASHVHPKLPDYDILTAHLLSLRQNRQ 1155


Top