BLASTX nr result

ID: Dioscorea21_contig00036915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036915
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33473.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002264885.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]   126   2e-27
ref|XP_003553000.1| PREDICTED: kinesin light chain 3-like [Glyci...   114   6e-24
ref|XP_002532534.1| kinesin light chain, putative [Ricinus commu...   112   4e-23
gb|ABK95240.1| unknown [Populus trichocarpa]                          111   5e-23

>emb|CBI33473.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  128 bits (322), Expect = 4e-28
 Identities = 76/157 (48%), Positives = 95/157 (60%), Gaps = 5/157 (3%)
 Frame = +2

Query: 38  LIRRTLGFSKRIQFALRFPAARIQSNINPCFA--LSGSPDICAQFCSSSSTWSKHHWRML 211
           L R      +RI F  +  AA   + I    +  LS   +   Q+ S   TW  HH  + 
Sbjct: 3   LRRAAAALHRRIPFTSQTVAASRYAKIANASSASLSSKMEHLNQYGSEGYTWRGHHKDIW 62

Query: 212 SGIMLFGQTALFIGLSENLVLAEESSVV---DNDQGQGFLAGLRRIEDGSVISNAHTSKW 382
             I + G  AL +GL+   VLAE+ S+    +ND G     GLRRIEDGSVISN HTSKW
Sbjct: 63  LWIFISGHAALVLGLNGQPVLAEDVSIELSSENDIGGANATGLRRIEDGSVISNMHTSKW 122

Query: 383 RIFTDNGRELFLKGKLDEAEKYFLAALEEAKEGFGTR 493
           RIFTD GRELFL+GKL+EAE +FL+AL+EAKEGFG +
Sbjct: 123 RIFTDQGRELFLQGKLEEAENFFLSALQEAKEGFGAK 159


>ref|XP_002264885.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]
          Length = 522

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/114 (57%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
 Frame = +2

Query: 161 QFCSSSSTWSKHHWRMLSGIMLFGQTALFIGLSENLVLAEESSVV---DNDQGQGFLAGL 331
           Q+ S   TW  HH  +   I + G  AL +GL+   VLAE+ S+    +ND G     GL
Sbjct: 6   QYGSEGYTWRGHHKDIWLWIFISGHAALVLGLNGQPVLAEDVSIELSSENDIGGANATGL 65

Query: 332 RRIEDGSVISNAHTSKWRIFTDNGRELFLKGKLDEAEKYFLAALEEAKEGFGTR 493
           RRIEDGSVISN HTSKWRIFTD GRELFL+GKL+EAE +FL+AL+EAKEGFG +
Sbjct: 66  RRIEDGSVISNMHTSKWRIFTDQGRELFLQGKLEEAENFFLSALQEAKEGFGAK 119


>ref|XP_003553000.1| PREDICTED: kinesin light chain 3-like [Glycine max]
          Length = 530

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/138 (46%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
 Frame = +2

Query: 89  FPAARIQSNINPCFALSGSPDICAQFCSSSSTWSKHHWRMLSGIMLFGQTALFIGLSENL 268
           FPA+ + +N     A SG   +   + +    W          I++ G  A+ +G+S + 
Sbjct: 22  FPASTVTTN-----AFSGKLKLSRWYQAGEHGWRIDLRDPCLWIVISGHVAMTLGISAST 76

Query: 269 VLAEESSVV---DNDQGQGFLAGLRRIEDGSVISNAHTSKWRIFTDNGRELFLKGKLDEA 439
           V AE+++     DND G G L GLR+IEDGSV+SN HT+KWR+FTD  RE FL+GKLDEA
Sbjct: 77  VFAEDATTEAYPDNDPG-GDLIGLRKIEDGSVVSNIHTAKWRVFTDKAREFFLQGKLDEA 135

Query: 440 EKYFLAALEEAKEGFGTR 493
           EK FL+A+EEAKEGFG +
Sbjct: 136 EKLFLSAIEEAKEGFGEK 153


>ref|XP_002532534.1| kinesin light chain, putative [Ricinus communis]
           gi|223527746|gb|EEF29850.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 503

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/94 (61%), Positives = 72/94 (76%), Gaps = 3/94 (3%)
 Frame = +2

Query: 221 MLFGQTALFIGLSENLVLAE---ESSVVDNDQGQGFLAGLRRIEDGSVISNAHTSKWRIF 391
           ++ GQ A+ +G++ N VLA    ES+     +G   + GLR+IEDGSVISN HTSKWRIF
Sbjct: 11  IIAGQAAIILGINANPVLANAPNESNSETESEGANVI-GLRKIEDGSVISNIHTSKWRIF 69

Query: 392 TDNGRELFLKGKLDEAEKYFLAALEEAKEGFGTR 493
           TDNGR  FL+GKLDEAEK+FL+ALEEAK+GFG R
Sbjct: 70  TDNGRAYFLQGKLDEAEKFFLSALEEAKKGFGNR 103


>gb|ABK95240.1| unknown [Populus trichocarpa]
          Length = 553

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 7/116 (6%)
 Frame = +2

Query: 167 CSSSSTWSKHHWRMLSG-----IMLFGQTALFIGLSENLVLAEE--SSVVDNDQGQGFLA 325
           CS    +    WRM S       +L GQ A+ +G++ N VLA+E   S   ND     + 
Sbjct: 43  CSYKYGFGGPSWRMNSRDCYLWTILAGQAAIILGINANPVLADEPRESSSQNDLDTDSMF 102

Query: 326 GLRRIEDGSVISNAHTSKWRIFTDNGRELFLKGKLDEAEKYFLAALEEAKEGFGTR 493
           G R+IEDGSVISN HT+KWR+F+D GRE+FL+GKLD+AEK+F +AL+EAKEGFG +
Sbjct: 103 GFRKIEDGSVISNEHTAKWRLFSDKGREVFLQGKLDQAEKFFFSALQEAKEGFGEK 158


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