BLASTX nr result

ID: Dioscorea21_contig00036632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036632
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79612.1|AC027665_13 F5M15.18 [Arabidopsis thaliana]              77   3e-12
ref|NP_173474.5| 4-coumarate--CoA ligase-like 4 [Arabidopsis tha...    77   3e-12
ref|XP_002893113.1| F5M15.18 [Arabidopsis lyrata subsp. lyrata] ...    76   4e-12
ref|NP_173473.2| 4-coumarate--CoA ligase-like 3 [Arabidopsis tha...    75   8e-12
sp|Q3E6Y4.2|4CLL3_ARATH RecName: Full=4-coumarate--CoA ligase-li...    75   8e-12

>gb|AAF79612.1|AC027665_13 F5M15.18 [Arabidopsis thaliana]
          Length = 1549

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSI+ PV+ L++MS+GAVF+TAN L T  E+  QI DSN +L+ TT  L+
Sbjct: 88  RGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLA 147

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 148 PKLPVAIS 155



 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 38/68 (55%), Positives = 50/68 (73%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSIY PV+ L++MS+GAV +TAN L T  E+  QI  SN +L+ TTS L+
Sbjct: 635 RGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLA 694

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 695 PKLAAAIS 702



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = -3

Query: 314  KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
            KG+VV+++SPNSI FP++ L++MS+GA+ +TAN + T  E+  QI DS   L  TT  L 
Sbjct: 1082 KGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLV 1141

Query: 134  HKL--DNLISKPLILIQDF 84
             KL   +  + P++L+ D+
Sbjct: 1142 SKLAAASNFNLPVVLMDDY 1160


>ref|NP_173474.5| 4-coumarate--CoA ligase-like 4 [Arabidopsis thaliana]
           gi|158517764|sp|P0C5B6.1|4CLL4_ARATH RecName:
           Full=4-coumarate--CoA ligase-like 4
           gi|332191858|gb|AEE29979.1| 4-coumarate--CoA ligase-like
           4 [Arabidopsis thaliana]
          Length = 550

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSI+ PV+ L++MS+GAVF+TAN L T  E+  QI DSN +L+ TT  L+
Sbjct: 88  RGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLA 147

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 148 PKLPVAIS 155


>ref|XP_002893113.1| F5M15.18 [Arabidopsis lyrata subsp. lyrata]
           gi|297338955|gb|EFH69372.1| F5M15.18 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1557

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/68 (55%), Positives = 50/68 (73%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSIY PV+ L++MS+GAV +TAN L T  E+  QI DSN +L+ TT  L+
Sbjct: 642 RGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTAGEISKQIADSNPTLVFTTRQLA 701

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 702 PKLSAAIS 709



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 35/63 (55%), Positives = 45/63 (71%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSI  PV+ LA+MS+GAV +TAN L T  E+  QI DS   L  TT +L+
Sbjct: 90  RGDVVLILSPNSISIPVVSLAVMSLGAVITTANLLNTASEISRQIADSKPKLAFTTPELA 149

Query: 134 HKL 126
            KL
Sbjct: 150 PKL 152



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = -3

Query: 314  KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
            KG+VV+++SPNSI FP++ L++MS+GA+ +TAN + T  E+  QI DS   L  TT  L 
Sbjct: 1090 KGNVVIILSPNSILFPIVSLSVMSLGAIITTANPVNTSDEISKQIGDSRPVLAFTTCQLL 1149

Query: 134  HKL 126
             KL
Sbjct: 1150 SKL 1152


>ref|NP_173473.2| 4-coumarate--CoA ligase-like 3 [Arabidopsis thaliana]
           gi|332191857|gb|AEE29978.1| 4-coumarate--CoA ligase-like
           3 [Arabidopsis thaliana]
          Length = 447

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 38/68 (55%), Positives = 50/68 (73%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSIY PV+ L++MS+GAV +TAN L T  E+  QI  SN +L+ TTS L+
Sbjct: 88  RGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLA 147

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 148 PKLAAAIS 155


>sp|Q3E6Y4.2|4CLL3_ARATH RecName: Full=4-coumarate--CoA ligase-like 3
          Length = 552

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 38/68 (55%), Positives = 50/68 (73%)
 Frame = -3

Query: 314 KGDVVLLVSPNSIYFPVIVLAIMSIGAVFSTANFLLTRQELESQIRDSNVSLILTTSDLS 135
           +GDVVL++SPNSIY PV+ L++MS+GAV +TAN L T  E+  QI  SN +L+ TTS L+
Sbjct: 88  RGDVVLILSPNSIYIPVVCLSVMSLGAVVTTANTLNTSGEISKQIAQSNPTLVFTTSQLA 147

Query: 134 HKLDNLIS 111
            KL   IS
Sbjct: 148 PKLAAAIS 155


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