BLASTX nr result

ID: Dioscorea21_contig00036456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036456
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002459858.1| hypothetical protein SORBIDRAFT_02g012480 [S...   106   2e-21
ref|NP_001061974.2| Os08g0459400 [Oryza sativa Japonica Group] g...    99   5e-19
ref|XP_003565883.1| PREDICTED: putative nuclease HARBI1-like [Br...    96   2e-18
gb|ACN26116.1| unknown [Zea mays]                                      92   4e-17
ref|NP_001149744.1| retrotransposon protein [Zea mays] gi|195630...    92   4e-17

>ref|XP_002459858.1| hypothetical protein SORBIDRAFT_02g012480 [Sorghum bicolor]
           gi|241923235|gb|EER96379.1| hypothetical protein
           SORBIDRAFT_02g012480 [Sorghum bicolor]
          Length = 189

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/73 (63%), Positives = 60/73 (82%)
 Frame = -2

Query: 290 FNLRHSSARTSIERAFGSLKGRFKILSSRPFFPFKTQAELVLACCVLHNYIISGGEDEFI 111
           FNLRHSS R ++ERAFGSLK RF+IL ++PF P+KTQ +LVLACC+LHN+I+  G DE I
Sbjct: 83  FNLRHSSLRVTVERAFGSLKNRFRILDNKPFHPYKTQVKLVLACCILHNWILRYGVDEII 142

Query: 110 PSEEDWIPQRNSQ 72
           P+EE+W+P   +Q
Sbjct: 143 PTEENWVPNPVNQ 155


>ref|NP_001061974.2| Os08g0459400 [Oryza sativa Japonica Group]
           gi|255678502|dbj|BAF23888.2| Os08g0459400 [Oryza sativa
           Japonica Group]
          Length = 705

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/66 (63%), Positives = 53/66 (80%)
 Frame = -2

Query: 290 FNLRHSSARTSIERAFGSLKGRFKILSSRPFFPFKTQAELVLACCVLHNYIISGGEDEFI 111
           FNLRHSS RTS+ERAFG+LK RFK+L+S+PFFP+K Q ++V+ACCVLHN+I+  G D  I
Sbjct: 323 FNLRHSSLRTSVERAFGTLKNRFKVLASKPFFPYKVQVKIVIACCVLHNWILDNGPDNII 382

Query: 110 PSEEDW 93
             E  W
Sbjct: 383 YDEARW 388


>ref|XP_003565883.1| PREDICTED: putative nuclease HARBI1-like [Brachypodium distachyon]
          Length = 325

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 41/67 (61%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 290 FNLRHSSARTSIERAFGSLKGRFKILSSRPFFPFKTQAELVLACCVLHNYI-ISGGEDEF 114
           FNLRHSS RT++ERAFG+LK RFK+L++RP++PF +Q  LV+ACC+LHN I ++GG DE 
Sbjct: 216 FNLRHSSLRTTVERAFGTLKNRFKVLTTRPYYPFPSQVRLVIACCILHNCILLNGGPDEL 275

Query: 113 IPSEEDW 93
           + SE++W
Sbjct: 276 VYSEQNW 282


>gb|ACN26116.1| unknown [Zea mays]
          Length = 298

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 290 FNLRHSSARTSIERAFGSLKGRFKILS-SRPFFPFKTQAELVLACCVLHNYIISGGEDEF 114
           FNLRHSS R ++ERAFGSLK RFKIL  + PFFPF TQ ++V+ACC++HN++I  G DE 
Sbjct: 192 FNLRHSSLRVTVERAFGSLKRRFKILDDATPFFPFSTQVDIVVACCIIHNWVIQDGGDEL 251

Query: 113 IPSEEDW 93
           I  E +W
Sbjct: 252 IIEESNW 258


>ref|NP_001149744.1| retrotransposon protein [Zea mays] gi|195630667|gb|ACG36640.1|
           retrotransposon protein [Zea mays]
          Length = 401

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 290 FNLRHSSARTSIERAFGSLKGRFKILS-SRPFFPFKTQAELVLACCVLHNYIISGGEDEF 114
           FNLRHSS R ++ERAFGSLK RFKIL  + PFFPF TQ ++V+ACC++HN++I  G DE 
Sbjct: 287 FNLRHSSLRVTVERAFGSLKRRFKILDDATPFFPFSTQVDIVVACCIIHNWVIQDGGDEL 346

Query: 113 IPSEEDW 93
           I  E +W
Sbjct: 347 IIEESNW 353


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