BLASTX nr result

ID: Dioscorea21_contig00036422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036422
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [S...   229   1e-58
gb|AFW76825.1| putative pentatricopeptide repeat family protein ...   228   5e-58
ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat...   228   5e-58
gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indi...   226   2e-57
ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group] g...   226   2e-57

>ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
            gi|241914995|gb|EER88139.1| hypothetical protein
            SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  229 bits (585), Expect = 1e-58
 Identities = 110/162 (67%), Positives = 131/162 (80%)
 Frame = -2

Query: 486  IPAEPSLMVWRALLGSCLVHKNAELGQMCAERVLEIEPQDESTYILLSNLYAKTGRWDSV 307
            IP+ PS MVWRALL SC+VHKN  LG+  AE+VLEIEPQDE+TY+LLSN+YA  G  D V
Sbjct: 616  IPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQV 675

Query: 306  ALTRKSMRSRGVKKEAGLSWIEIQGEVHSFSVGDKSHPDLRLINAMLEWLYIRIKKMGYV 127
            AL RKSMR+ GVKKE GLSW+EI+GEVH+FSVG   HPD+R+INAMLEWL ++  + GYV
Sbjct: 676  ALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYV 735

Query: 126  PESDVVLHDIVEEQKERLLWVHSERLALALGLLNVPPRCPIR 1
            P+ +VVLHD+ EE+K R+LWVHSERLALA GL   PP  PIR
Sbjct: 736  PDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIR 777


>gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -2

Query: 486  IPAEPSLMVWRALLGSCLVHKNAELGQMCAERVLEIEPQDESTYILLSNLYAKTGRWDSV 307
            IP+ PS MVWRALL SC+VHKN  LG+  AE+VL+IEP DE+TY+LLSN+YA  G  D V
Sbjct: 614  IPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEV 673

Query: 306  ALTRKSMRSRGVKKEAGLSWIEIQGEVHSFSVGDKSHPDLRLINAMLEWLYIRIKKMGYV 127
            AL RKSMR+ GVKKEAGLSW+EI+GEVH+FSVG   HPD+R+INAMLEWL ++  + GYV
Sbjct: 674  ALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYV 733

Query: 126  PESDVVLHDIVEEQKERLLWVHSERLALALGLLNVPPRCPIR 1
            P+ +VVLHD+ EE+K R+LWVHSERLALA GL   PP  PIR
Sbjct: 734  PDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIR 775


>ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  228 bits (580), Expect = 5e-58
 Identities = 108/162 (66%), Positives = 132/162 (81%)
 Frame = -2

Query: 486  IPAEPSLMVWRALLGSCLVHKNAELGQMCAERVLEIEPQDESTYILLSNLYAKTGRWDSV 307
            IP+ PS MVWRALL SC+VHKN ELG+  AE+VLEIEPQDE+TY+LLSN+Y+  G  D V
Sbjct: 997  IPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQV 1056

Query: 306  ALTRKSMRSRGVKKEAGLSWIEIQGEVHSFSVGDKSHPDLRLINAMLEWLYIRIKKMGYV 127
            A  RKSMR+ GV+KE GLSW+EI+GEVH+FSVG + HP +R+INAMLEWL ++  + GYV
Sbjct: 1057 AFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYV 1116

Query: 126  PESDVVLHDIVEEQKERLLWVHSERLALALGLLNVPPRCPIR 1
            P++D VLHD+ EEQK R+LWVHSERLALA GL+  PP  PIR
Sbjct: 1117 PDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIR 1158


>gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/162 (64%), Positives = 131/162 (80%)
 Frame = -2

Query: 486  IPAEPSLMVWRALLGSCLVHKNAELGQMCAERVLEIEPQDESTYILLSNLYAKTGRWDSV 307
            IP+ PS MVWRALL SC++HKN  LG+  AE++LEIEPQDE+TY+LLSN+YA  G  D V
Sbjct: 609  IPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQV 668

Query: 306  ALTRKSMRSRGVKKEAGLSWIEIQGEVHSFSVGDKSHPDLRLINAMLEWLYIRIKKMGYV 127
            AL RKSMR+ GV+K  GLSW+EI+GE+H+FSVG   HPD+R+INAMLEWL ++  + GY+
Sbjct: 669  ALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYI 728

Query: 126  PESDVVLHDIVEEQKERLLWVHSERLALALGLLNVPPRCPIR 1
            P+ +VVLHD+ +EQK R+LWVHSERLALA GL+  PP  PIR
Sbjct: 729  PDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIR 770


>ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
            gi|108709057|gb|ABF96852.1| pentatricopeptide, putative,
            expressed [Oryza sativa Japonica Group]
            gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa
            Japonica Group] gi|215767379|dbj|BAG99607.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  226 bits (575), Expect = 2e-57
 Identities = 104/162 (64%), Positives = 131/162 (80%)
 Frame = -2

Query: 486  IPAEPSLMVWRALLGSCLVHKNAELGQMCAERVLEIEPQDESTYILLSNLYAKTGRWDSV 307
            IP+ PS MVWRALL SC++HKN  LG+  AE++LEIEPQDE+TY+LLSN+YA  G  D V
Sbjct: 628  IPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQV 687

Query: 306  ALTRKSMRSRGVKKEAGLSWIEIQGEVHSFSVGDKSHPDLRLINAMLEWLYIRIKKMGYV 127
            AL RKSMR+ GV+K  GLSW+EI+GE+H+FSVG   HPD+R+INAMLEWL ++  + GY+
Sbjct: 688  ALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYI 747

Query: 126  PESDVVLHDIVEEQKERLLWVHSERLALALGLLNVPPRCPIR 1
            P+ +VVLHD+ +EQK R+LWVHSERLALA GL+  PP  PIR
Sbjct: 748  PDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIR 789