BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036402
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat...   164   7e-39
ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat...   138   5e-31
ref|NP_188131.1| pentatricopeptide repeat-containing protein [Ar...   137   1e-30
dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]        137   1e-30

>ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera] gi|296083673|emb|CBI23662.3|
           unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/140 (58%), Positives = 98/140 (70%)
 Frame = -1

Query: 422 GKWSECAELREXXXXXXXXXXXGCSWIEINKEMHFFYGGYNTHPETEKIHFXXXXXXXXX 243
           G W EC  +R+           G SW+EINKE+HFFYGG +THP TEKIH          
Sbjct: 526 GYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRV 585

Query: 242 XXXLGYVLGVSYALHDVEDESKEENLRMHSEKLAIGLWLVVNGGKEKGEAIRVYKNLRVC 63
              +GY  G+ +ALHDVE+ESKEENLR+HSEKLAIGL LV +G ++KG  IRV+KNLRVC
Sbjct: 586 KEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVC 645

Query: 62  GDCHEFIKGVSKVLDIVLVV 3
           GDCHEFIKG+SK+L  V VV
Sbjct: 646 GDCHEFIKGLSKILKKVFVV 665


>ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|222855551|gb|EEE93098.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/140 (59%), Positives = 97/140 (69%)
 Frame = -1

Query: 422 GKWSECAELREXXXXXXXXXXXGCSWIEINKEMHFFYGGYNTHPETEKIHFXXXXXXXXX 243
           G W EC  +RE           G SW+EI+KE+HFFYGG +THP TEKIH          
Sbjct: 494 GYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRM 553

Query: 242 XXXLGYVLGVSYALHDVEDESKEENLRMHSEKLAIGLWLVVNGGKEKGEAIRVYKNLRVC 63
              LGYV GV YALHDVE+ESK +NLR+HSEKLAIGL LV  G +E  + IRV+KNLRVC
Sbjct: 554 KEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVC 613

Query: 62  GDCHEFIKGVSKVLDIVLVV 3
           GDCHEFIKG+SK+L +V VV
Sbjct: 614 GDCHEFIKGLSKILRVVFVV 633


>ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/141 (51%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = -1

Query: 422 GKWSECAELREXXXXXXXXXXXGCSWIEINKEMHFFYGGYNTHPETEKIHFXXXXXXXXX 243
           G W E  ++RE           G SW+E++KE+H FY G   HP  E+IH          
Sbjct: 426 GYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRV 485

Query: 242 XXXLGYVLGVSYALHDVEDESKEENLRMHSEKLAIGLWLVVNGGKEKGE-AIRVYKNLRV 66
              +GYV  ++++LHDVE+ESK E+LR+HSEKLAIGL LV  G K KGE  IR++KNLRV
Sbjct: 486 KEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRV 545

Query: 65  CGDCHEFIKGVSKVLDIVLVV 3
           CGDCH FIKG+SKVL I  VV
Sbjct: 546 CGDCHAFIKGLSKVLKIAFVV 566


>ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546753|sp|P0C898.1|PP232_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g15130 gi|332642102|gb|AEE75623.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 689

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/140 (50%), Positives = 86/140 (61%)
 Frame = -1

Query: 422 GKWSECAELREXXXXXXXXXXXGCSWIEINKEMHFFYGGYNTHPETEKIHFXXXXXXXXX 243
           G W+E    RE           G SW+EI +E+HFF  G ++HP T  I           
Sbjct: 530 GYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRL 589

Query: 242 XXXLGYVLGVSYALHDVEDESKEENLRMHSEKLAIGLWLVVNGGKEKGEAIRVYKNLRVC 63
              LGYV G+ + LHD++DESKEENLR HSEKLAIGL L   G  +KG+ IRV+KNLRVC
Sbjct: 590 REELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVC 649

Query: 62  GDCHEFIKGVSKVLDIVLVV 3
            DCHEFIKG+SK+  I  VV
Sbjct: 650 VDCHEFIKGLSKITKIAYVV 669


>dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  137 bits (344), Expect = 1e-30
 Identities = 71/140 (50%), Positives = 86/140 (61%)
 Frame = -1

Query: 422  GKWSECAELREXXXXXXXXXXXGCSWIEINKEMHFFYGGYNTHPETEKIHFXXXXXXXXX 243
            G W+E    RE           G SW+EI +E+HFF  G ++HP T  I           
Sbjct: 901  GYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRL 960

Query: 242  XXXLGYVLGVSYALHDVEDESKEENLRMHSEKLAIGLWLVVNGGKEKGEAIRVYKNLRVC 63
               LGYV G+ + LHD++DESKEENLR HSEKLAIGL L   G  +KG+ IRV+KNLRVC
Sbjct: 961  REELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVC 1020

Query: 62   GDCHEFIKGVSKVLDIVLVV 3
             DCHEFIKG+SK+  I  VV
Sbjct: 1021 VDCHEFIKGLSKITKIAYVV 1040