BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036349
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864412.1| pentatricopeptide repeat-containing protein ...    46   3e-09
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...    45   2e-08
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...    47   5e-08
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]    47   6e-08
dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]         42   6e-08

>ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310247|gb|EFH40671.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1245

 Score = 46.2 bits (108), Expect(2) = 3e-09
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = -1

Query: 277 LKSLSWIAQRQGFDQAAHIPIFCITTHLLARVRMFKHAKFILEHTCRLS 131
           LK L W+ ++ G D    + +FCITTH+L R RM+  A+ IL+    +S
Sbjct: 54  LKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMS 102



 Score = 39.7 bits (91), Expect(2) = 3e-09
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = -2

Query: 132 VYIQKRMLKDAIEMFRLMVLQGVKASVYSCN 40
           VY+++ M++D++E+FRLM L G   SVY+CN
Sbjct: 132 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 162


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score = 44.7 bits (104), Expect(2) = 2e-08
 Identities = 20/53 (37%), Positives = 34/53 (64%)
 Frame = -1

Query: 277 LKSLSWIAQRQGFDQAAHIPIFCITTHLLARVRMFKHAKFILEHTCRLSLYSK 119
           LK L+W+ Q+ G +      +  ITTH+L R R++++AK IL+H  ++ + SK
Sbjct: 29  LKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSK 81



 Score = 38.5 bits (88), Expect(2) = 2e-08
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = -2

Query: 132 VYIQKRMLKDAIEMFRLMVLQGVKASVYSCN 40
           VY+++ M+ DA+E FRLM ++G   SVY+CN
Sbjct: 107 VYLREGMVGDALETFRLMGIRGFNPSVYTCN 137


>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score = 47.4 bits (111), Expect(2) = 5e-08
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -1

Query: 277  LKSLSWIAQRQGFDQAAHIPIFCITTHLLARVRMFKHAKFILEHTCRLSLYSK 119
            LK L W+ ++ G +      ++C+T H+L + RM+  AK IL H C++ + SK
Sbjct: 845  LKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSK 897



 Score = 34.3 bits (77), Expect(2) = 5e-08
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 132  VYIQKRMLKDAIEMFRLMVLQGVKASVYSCN 40
            VY+++ M+  A+E F L+ L G K SVY+CN
Sbjct: 923  VYLKEGMIDYAVETFELVGLVGFKPSVYTCN 953


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score = 47.4 bits (111), Expect(2) = 6e-08
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -1

Query: 277 LKSLSWIAQRQGFDQAAHIPIFCITTHLLARVRMFKHAKFILEHTCRLSLYSK 119
           LK L W+ ++ G +      ++C+T H+L + RM+  AK IL H C++ + SK
Sbjct: 94  LKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSK 146



 Score = 34.3 bits (77), Expect(2) = 6e-08
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -2

Query: 132 VYIQKRMLKDAIEMFRLMVLQGVKASVYSCN 40
           VY+++ M+  A+E F L+ L G K SVY+CN
Sbjct: 172 VYLKEGMIDYAVETFELVGLVGFKPSVYTCN 202


>dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score = 42.0 bits (97), Expect(2) = 6e-08
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -1

Query: 277 LKSLSWIAQRQGFDQAAHIPIFCITTHLLARVRMFKHAKFILEHTCRLS 131
           LK L W+ ++ G +    + + CITTH+L R RM+  A+ IL+    +S
Sbjct: 54  LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMS 102



 Score = 39.7 bits (91), Expect(2) = 6e-08
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = -2

Query: 132 VYIQKRMLKDAIEMFRLMVLQGVKASVYSCN 40
           VY+++ M++D++E+FRLM L G   SVY+CN
Sbjct: 132 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 162