BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036327
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001785902.1| predicted protein [Physcomitrella patens sub...    62   4e-08
gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygr...    62   6e-08
gb|ABR16520.1| unknown [Picea sitchensis]                              61   8e-08
ref|NP_189226.2| pentatricopeptide repeat-containing protein [Ar...    59   4e-07
ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ...    59   4e-07

>ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162662428|gb|EDQ49285.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 908

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTWTI 5
           H  A+ AG +S++ VGN ++H+YAK GS++ AR +FD+ML+RD  +WT+
Sbjct: 559 HSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTV 607



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = -2

Query: 226 SFTDLLKIISRRRIPPPSLLE-IELQHCKAIKAGFISNISVGNGILHLYAKFGSLEFARN 50
           + T  L I++   I     LE ++  H  A KAGFIS++ VGN ++H+YAK GS++ AR 
Sbjct: 231 NLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARL 290

Query: 49  LFDEMLQRDALTW 11
           +FD M  RD ++W
Sbjct: 291 VFDGMCDRDVISW 303



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/49 (44%), Positives = 35/49 (71%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTWTI 5
           H  A+ AG   ++ VGN ++H+YAK GS++ AR +FD M++RD  +WT+
Sbjct: 154 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTV 202


>gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = -2

Query: 226 SFTDLLKIISRRRIPPPSLLE-IELQHCKAIKAGFISNISVGNGILHLYAKFGSLEFARN 50
           + T  L I++   I   S LE +++ H  A +AGFIS++ +GN ++H+YAK GS++ AR 
Sbjct: 420 NLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARL 479

Query: 49  LFDEMLQRDALTW 11
           +FD M  RD ++W
Sbjct: 480 VFDGMCDRDVISW 492



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 23/49 (46%), Positives = 39/49 (79%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTWTI 5
           H  A+ AG +S++ VGN ++H+YAK GS++ AR++FD+M++RD  +WT+
Sbjct: 748 HNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTV 796



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTWTI 5
           H  A+ AG   ++ VGN ++H+YAK GS++ AR +FD M +RD  +WT+
Sbjct: 343 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTV 391


>gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTW 11
           H + +K GF SN+ VGNG++ +YAK G +EFAR LFD+M QRD ++W
Sbjct: 186 HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSW 232


>ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g25970 gi|332643575|gb|AEE77096.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -2

Query: 175 SLLEIELQHCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTW 11
           S  ++ L HC AIK G IS+I V N IL  Y KFG L +A  LFDEM +RD+++W
Sbjct: 15  SFQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSW 69


>ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523764|gb|AET04218.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = -2

Query: 151 HCKAIKAGFISNISVGNGILHLYAKFGSLEFARNLFDEMLQRDALTWT 8
           H  A   GF++++ VGN I+H+Y KFG L+ AR +FDEM  RD +TWT
Sbjct: 132 HLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWT 179