BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036319
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   177   1e-42
ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   172   2e-41
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   162   4e-38

>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/173 (49%), Positives = 118/173 (68%)
 Frame = -2

Query: 519 SVLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHG 340
           ++LWN+ + LN++  +    ++ F+KMQ   +KA+  TI + L ACG++  L   K +HG
Sbjct: 199 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 258

Query: 339 YAIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDD 160
           Y  R G  S + + N LI+MYS N   ELARRVF SME+RN  SWNS+IS +A  GFL+D
Sbjct: 259 YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 318

Query: 159 AFELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPNSS 1
           A+ LF E+ SS ++PD+V+WNCLLSGH LHG  +E +NIL+RM     KPNSS
Sbjct: 319 AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 371



 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/170 (35%), Positives = 98/170 (57%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           V WN +++ +  +G     L   Q+MQ    K +  ++   L A   L  L  GK  HGY
Sbjct: 336 VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY 395

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
            +R+G+   + VG  LI MY  N S   A+ VF +M++RN+ +WNS++SG++  G  +DA
Sbjct: 396 VLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDA 455

Query: 156 FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPN 7
             L N+M   G++PDLV+WN ++SG+++ G   EA+ +L +   + L PN
Sbjct: 456 LRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPN 505



 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 52/163 (31%), Positives = 89/163 (54%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           V W  +++ + + G   ++L+ F +MQ   +  +  +I   L AC  L  L++GK +H  
Sbjct: 507 VSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCL 566

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
           +IR+G+   + V   LI MYS ++S + A +VF+ ++++ L SWN +I GFA+ G   +A
Sbjct: 567 SIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEA 626

Query: 156 FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRML 28
             +FNEM   G+ PD +++  LLS     G   E       M+
Sbjct: 627 ISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 669


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/173 (49%), Positives = 118/173 (68%)
 Frame = -2

Query: 519  SVLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHG 340
            ++LWN+ + LN++  +    ++ F+KMQ   +KA+  TI + L ACG++  L   K +HG
Sbjct: 740  ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 799

Query: 339  YAIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDD 160
            Y  R G  S + + N LI+MYS N   ELARRVF SME+RN  SWNS+IS +A  GFL+D
Sbjct: 800  YVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLND 859

Query: 159  AFELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPNSS 1
            A+ LF E+ SS ++PD+V+WNCLLSGH LHG  +E +NIL+RM     KPNSS
Sbjct: 860  AWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSS 912



 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/155 (36%), Positives = 90/155 (58%)
 Frame = -2

Query: 516  VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
            V WN +++ +  +G     L   Q+MQ    K +  ++   L A   L  L  GK  HGY
Sbjct: 877  VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY 936

Query: 336  AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
             +R+G+   + VG  LI MY  N S   A+ VF +M++RN+ +WNS++SG++  G  +DA
Sbjct: 937  VLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDA 996

Query: 156  FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEA 52
              L N+M   G++PDLV+WN ++SG+++ G   +A
Sbjct: 997  LRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
 Frame = -2

Query: 510  WNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVT------------------------I 403
            WN +V+     G + +AL+   +M+   IK D VT                        I
Sbjct: 980  WNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASI 1039

Query: 402  AKALHACGRLRTLKEGKALHGYAIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMES 223
               L AC  L  L++GK +H  +IR+G+   + V   LI MYS ++S + A +VF+ +++
Sbjct: 1040 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 1099

Query: 222  RNLVSWNSIISGFALNGFLDDAFELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNI 43
            + L SWN +I GFA+ G   +A  +FNEM   G+ PD +++  LLS     G   E    
Sbjct: 1100 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 1159

Query: 42   LRRML 28
               M+
Sbjct: 1160 FDSMI 1164


>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/175 (46%), Positives = 117/175 (66%)
 Frame = -2

Query: 525 KSSVLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKAL 346
           +  + WN+ + +N++   + NA++ F+ MQ    KAD  T+ K L ACG+   L EGK +
Sbjct: 229 RDGLFWNEAIMINLKNERFGNAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQI 288

Query: 345 HGYAIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFL 166
           HGY I+    S L + N LI+MYS N    L+RRVF SM+  NL SWNSIIS +   G+L
Sbjct: 289 HGYVIKHALESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNLSSWNSIISSYTALGYL 348

Query: 165 DDAFELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPNSS 1
           + A++LF+EM SS ++PD+++WNCLLSGH+LHGS  E + IL++M V   +PNSS
Sbjct: 349 NGAWKLFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSS 403



 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/170 (35%), Positives = 98/170 (57%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           + WN +++ +  +G +   L   QKMQ    + +  +I   L     LR LK GK +HGY
Sbjct: 368 ITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRLLKIGKGIHGY 427

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
            IR+  +  L V   L+ MY  N     ++ VF +M++RN+V+WNS+I+G+A  G  DDA
Sbjct: 428 VIRNRLNPDLYVEASLLDMYVKNNCLATSQAVFDNMKNRNIVAWNSLITGYAYKGLFDDA 487

Query: 156 FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPN 7
             L N+M   G++ D+V+WN L+SG+S+ G  +EA+ ++  +    L PN
Sbjct: 488 KRLLNKMKEEGIRADIVTWNGLVSGYSIWGHNEEALAVINEIKSSGLTPN 537



 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/144 (32%), Positives = 86/144 (59%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           V W  +++   + G +  +L+ F +MQ   IK +  T++  L  CG L  LK+GK +H  
Sbjct: 539 VSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTTVSSLLKTCGGLSLLKKGKEIHCL 598

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
           +++SG++  + +   L+ MYS + + + AR VF+  +++ L  WN +I GFA+ G   +A
Sbjct: 599 SVKSGFTGDIYIATALVDMYSKSGNLKSAREVFKRTKNKTLACWNCMIMGFAIYGLGKEA 658

Query: 156 FELFNEMISSGLQPDLVSWNCLLS 85
             L++EM+ +G+ PD +++  LLS
Sbjct: 659 ISLYDEMLGAGILPDSITFTALLS 682


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/170 (48%), Positives = 111/170 (65%)
 Frame = -2

Query: 513 LWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGYA 334
           LWN +V  N+    W +AL+  ++MQ+ S KA + TI K L ACG+LR L EGK +HGY 
Sbjct: 199 LWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYV 258

Query: 333 IRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDAF 154
           IR G  S   + N +++MYS N   ELAR VF S E  NL SWNSIIS +A+NG L+ A+
Sbjct: 259 IRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAW 318

Query: 153 ELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPNS 4
           +LF EM SS ++PD+++WN LLSGH L GS +  +  +R +     KP+S
Sbjct: 319 DLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDS 368



 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/170 (34%), Positives = 96/170 (56%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           + WN +++ ++  G + N L   + +Q+   K D  +I  AL A   L     GK +HGY
Sbjct: 334 ITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGY 393

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
            +RS     + V   L+ MY  N   E A  VF   +++N+ +WNS+ISG+   G  D+A
Sbjct: 394 IMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNA 453

Query: 156 FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPN 7
            +L  +M   G++ DLV+WN L+SG+S+ G ++EA+ ++ R+  + L PN
Sbjct: 454 EKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPN 503



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/145 (30%), Positives = 85/145 (58%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           V W  +++   +   + +ALQ F +MQ  ++K +  TI+  L AC     LK+G+ +H +
Sbjct: 505 VSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCF 564

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
           +++ G+   + +   LI MYS     ++A  VF++++ + L  WN ++ G+A+ G  ++ 
Sbjct: 565 SMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEV 624

Query: 156 FELFNEMISSGLQPDLVSWNCLLSG 82
           F LF+ M  +G++PD +++  LLSG
Sbjct: 625 FTLFDNMCKTGIRPDAITFTALLSG 649


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  162 bits (409), Expect = 4e-38
 Identities = 80/170 (47%), Positives = 109/170 (64%)
 Frame = -2

Query: 513 LWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGYA 334
           LWN +V  N+   +W +AL+ F++MQ+ S KA + TI K L ACG+LR L EGK +HGY 
Sbjct: 199 LWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYV 258

Query: 333 IRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDAF 154
           IR G  S   + N +++MYS N   ELAR  F S E  N  SWNSIIS +A+N  L+ A+
Sbjct: 259 IRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAW 318

Query: 153 ELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPNS 4
           +L  EM SSG++PD+++WN LLSGH L GS +  +   R +     KP+S
Sbjct: 319 DLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDS 368



 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/170 (34%), Positives = 98/170 (57%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           + WN +++ ++  G + N L  F+ +Q+   K D  +I  AL A   L     GK +HGY
Sbjct: 334 ITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGY 393

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
            +RS     + V   L+  Y  N   + A  VF   +++N+ +WNS+ISG+   G  D+A
Sbjct: 394 IMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNA 453

Query: 156 FELFNEMISSGLQPDLVSWNCLLSGHSLHGSTDEAMNILRRMLVMDLKPN 7
            +L N+M   G++PDLV+WN L+SG+S+ G ++EA+ ++ R+  + L PN
Sbjct: 454 EKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPN 503



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/145 (31%), Positives = 84/145 (57%)
 Frame = -2

Query: 516 VLWNKVVTLNVEYGEWLNALQCFQKMQTLSIKADEVTIAKALHACGRLRTLKEGKALHGY 337
           V W  +++   +   +++ALQ F +MQ  ++K +  TI   L AC     LK G+ +H +
Sbjct: 505 VSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCF 564

Query: 336 AIRSGYSSALLVGNVLIAMYSHNASAELARRVFQSMESRNLVSWNSIISGFALNGFLDDA 157
           ++R G+   + +   LI MY      ++A  VF++++ + L  WN ++ G+A+ G  ++ 
Sbjct: 565 SMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEV 624

Query: 156 FELFNEMISSGLQPDLVSWNCLLSG 82
           F LF+EM  +G++PD +++  LLSG
Sbjct: 625 FTLFDEMRKTGVRPDAITFTALLSG 649