BLASTX nr result

ID: Dioscorea21_contig00036317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036317
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              145   5e-33
ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810...   138   6e-31
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...   112   4e-23
ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...   106   3e-21
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...   100   2e-19

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  145 bits (365), Expect = 5e-33
 Identities = 73/179 (40%), Positives = 107/179 (59%)
 Frame = -1

Query: 540 QSLEVEGCIPELPVQVQGYTLKMPVFHLPIAGAEIILGAAWLATLGAHMVDYSTLSIQFY 361
           Q L  EG + +LP+ +QG  +K+PV+ L I+GA++ILG+ WLATLG H+ DY+ L+++F+
Sbjct: 441 QILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKFF 500

Query: 360 HNQQFITLHGDKDAAPQQLSLHQLNRLTTTKAIAECYEVIQENHNTPPDHDNQVVTFNSP 181
            N +FITL G+ ++   Q  LH   RL  TK+I EC+ +             Q++    P
Sbjct: 501 QNDKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAI-------------QLIQKEVP 547

Query: 180 AAQEVQLLSDLPDTLKQLLLKYHIIFSLPQGLPPTRSCDHKIILHEGAQPVKVRPYRYP 4
                 L +++   L  LL  Y  +F++P  LPP R  DH I L +G+ PVKVRPYRYP
Sbjct: 548 EDTLKDLPTNIDPELAILLHTYAQVFAVPASLPPQREQDHAIPLKQGSGPVKVRPYRYP 606


>ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
          Length = 1273

 Score =  138 bits (347), Expect = 6e-31
 Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 2/174 (1%)
 Frame = -1

Query: 522 GCIPELPVQVQGYTLKMPVFHLPIAGAEIILGAAWLATLGAHMVDYSTLSIQFYHNQQFI 343
           G I EL +Q QG   ++PVF LPI+GA++ILGA WL TLG+H+ DY +L I+F H+ +FI
Sbjct: 371 GMIRELSIQAQGNRFQLPVFLLPISGADLILGAIWLKTLGSHIADYDSLQIKFLHDGKFI 430

Query: 342 TLHGDKDAAPQQLSLHQLNRLTTTKAIAECY--EVIQENHNTPPDHDNQVVTFNSPAAQE 169
           TL GD D  P Q  LH + R+ +T +IAE +  ++I+ ++            F  P +  
Sbjct: 431 TLQGDDDGTPTQAHLHHIRRMISTDSIAEVFSMQLIEPSN------------FQFPLS-- 476

Query: 168 VQLLSDLPDTLKQLLLKYHIIFSLPQGLPPTRSCDHKIILHEGAQPVKVRPYRY 7
            +L  +L   L  LL  Y  +F  P  LPP +S DH I L EG++PVKV+PYR+
Sbjct: 477 -ELPINLEPELALLLHTYEFVFETPTSLPPPKSHDHAIPLLEGSKPVKVKPYRH 529


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score =  112 bits (280), Expect = 4e-23
 Identities = 63/179 (35%), Positives = 95/179 (53%)
 Frame = -1

Query: 540 QSLEVEGCIPELPVQVQGYTLKMPVFHLPIAGAEIILGAAWLATLGAHMVDYSTLSIQFY 361
           + L+     PE+ V +Q +T  +    LPI GA+++LG  WL +LG  + DY+TL+++F 
Sbjct: 464 EELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLTDYATLTMKFI 523

Query: 360 HNQQFITLHGDKDAAPQQLSLHQLNRLTTTKAIAECYEVIQENHNTPPDHDNQVVTFNSP 181
           +N + I L GD+DA   Q+S  QL RL  T   +  + +  ++H+  P      +T + P
Sbjct: 524 YNDKLIELKGDRDANIDQISPSQLRRLMNTGNTSTYFHIQLDSHHPEP----LPLTHSIP 579

Query: 180 AAQEVQLLSDLPDTLKQLLLKYHIIFSLPQGLPPTRSCDHKIILHEGAQPVKVRPYRYP 4
           A Q              LL KY  +F     LPP+R+ DH I L   + P+ VRPYRYP
Sbjct: 580 AIQ-------------TLLTKYSSLFQPLTNLPPSRATDHSINLLPNSTPINVRPYRYP 625


>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score =  106 bits (264), Expect = 3e-21
 Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
 Frame = -1

Query: 513 PELPVQVQGYTLKMPVFHLPIAGAEIILGAAWLATLGAHMVDYSTLSIQFYHNQQFITLH 334
           P+  + +Q +   +    LPI+GA++ILG  WL  LG    DY++L ++F+H  Q + LH
Sbjct: 409 PDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPITTDYTSLIMKFHHLGQPVELH 468

Query: 333 GDKDAAPQQLSLHQLNRLTTTKAIAECYE--VIQENHNTPPDHDNQVVTFNSPAAQEVQL 160
            D D  P  +S  Q+ R+  T A +  +   V+  +  T P H       + PA      
Sbjct: 469 VDADHGPHPISATQIKRMIQTNATSALFHLCVLPASDTTIPQHPPSSTPSSIPA------ 522

Query: 159 LSDLPDTLKQLLLKYHIIFSLPQGLPPTRSCDHKIILHEGAQPVKVRPYRYP 4
                  +  L+ KY  +F  P  LPP+RS DH I L    +P+ VRPYRYP
Sbjct: 523 -------IDALIHKYQSLFQTPTALPPSRSIDHHIHLRPNTEPINVRPYRYP 567


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score =  100 bits (248), Expect = 2e-19
 Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
 Frame = -1

Query: 534 LEVEGCIPELPVQVQGYTLKMPVFHLPIAGAEIILGAAWLATLGAHMVDYSTLSIQFYHN 355
           LE +   P   + +Q ++  + +  LPI+GA+++LG  WL TLG  + DY++ ++QF H 
Sbjct: 358 LECKQSCPATTLLLQQHSFTVTLRVLPISGADVVLGVEWLRTLGPIITDYTSFTMQFTHL 417

Query: 354 QQFITLHGDKDAAPQQLSLHQLNRLTTTKAIAECYEV-IQENH--NTPPDHDNQVVTFNS 184
            Q I L  D        S HQ+ RL  T +++  + + +   H   T PD  + +   N 
Sbjct: 418 GQPIILRADVTTCTDTASAHQVKRLLHTHSLSGLFHLSLLPTHIPETAPDPPHPISAIN- 476

Query: 183 PAAQEVQLLSDLPDTLKQLLLKYHIIFSLPQGLPPTRSCDHKIILHEGAQPVKVRPYRYP 4
                            +LLL++H IF  P  LPP R  DH I L   A PV VRPY+YP
Sbjct: 477 -----------------ELLLRFHTIFQQPSSLPPPRQHDHYINLIPSAHPVNVRPYKYP 519


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