BLASTX nr result

ID: Dioscorea21_contig00036313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036313
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306863.1| GRAS family transcription factor [Populus tr...   192   2e-47
ref|XP_002302035.1| GRAS family transcription factor [Populus tr...   190   9e-47
emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]   187   1e-45
ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vin...   186   1e-45
ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus commun...   186   2e-45

>ref|XP_002306863.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222856312|gb|EEE93859.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 519

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/118 (76%), Positives = 104/118 (88%)
 Frame = -2

Query: 358 AHFTANQAILEAFHQKDIVHIVDLDIMHGLQWPALFHILATRPEGPPLVRLTGFGSSMEA 179
           AHFT+NQ+ILEAFH++D VH++DLDIM GLQWPALFHILATR +GPP VR+TG G+SME 
Sbjct: 241 AHFTSNQSILEAFHRRDRVHVIDLDIMQGLQWPALFHILATRIDGPPQVRMTGMGTSMEL 300

Query: 178 LEETGRQLSTFAKRLGMSLEFHPVAKRSGDIDPWMVQARRGETMAVHWLQHSLYDATG 5
           L ETGRQLS FAKRLGMS EFHP+AK+ G+ID  MV  RRGET+AVHWLQH+LYDATG
Sbjct: 301 LLETGRQLSNFAKRLGMSFEFHPIAKKFGEIDASMVPLRRGETVAVHWLQHTLYDATG 358


>ref|XP_002302035.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222843761|gb|EEE81308.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 512

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/118 (76%), Positives = 102/118 (86%)
 Frame = -2

Query: 358 AHFTANQAILEAFHQKDIVHIVDLDIMHGLQWPALFHILATRPEGPPLVRLTGFGSSMEA 179
           AHFT+NQAILEAF ++D VHI+DLDIM GLQWPALFHILATR EGPP VR+TG GSSME 
Sbjct: 239 AHFTSNQAILEAFQRRDSVHIIDLDIMQGLQWPALFHILATRIEGPPQVRMTGMGSSMEV 298

Query: 178 LEETGRQLSTFAKRLGMSLEFHPVAKRSGDIDPWMVQARRGETMAVHWLQHSLYDATG 5
           L ETG+QLS FA+RLG+  EFHP+AK+ G+ID  MV  RRGET+AVHWLQHSLYDATG
Sbjct: 299 LVETGKQLSNFARRLGLPFEFHPIAKKFGEIDVSMVPLRRGETLAVHWLQHSLYDATG 356


>emb|CAN60709.1| hypothetical protein VITISV_027284 [Vitis vinifera]
          Length = 487

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/119 (73%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -2

Query: 358 AHFTANQAILEAFHQKDIVHIVDLDIMHGLQWPALFHILATRPEGPPLVRLTGFGSSMEA 179
           AHFT+NQ+ILEAFH++D+VHI+DLDIM GLQWPALFHILATR EGPP +R+TG GSS+E 
Sbjct: 212 AHFTSNQSILEAFHRRDLVHIIDLDIMQGLQWPALFHILATRIEGPPHIRMTGMGSSIEL 271

Query: 178 LEETGRQLSTFAKRLGMSLEFHPVAKRSGDI-DPWMVQARRGETMAVHWLQHSLYDATG 5
           L +TG+QLS FA+RLG+S EFHPVAK+ G+I D   +Q RRGET+AVHWLQHSLYDATG
Sbjct: 272 LTQTGKQLSNFARRLGLSFEFHPVAKKFGEINDITSLQIRRGETLAVHWLQHSLYDATG 330


>ref|XP_002272465.2| PREDICTED: protein SCARECROW-like [Vitis vinifera]
          Length = 487

 Score =  186 bits (473), Expect = 1e-45
 Identities = 88/119 (73%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
 Frame = -2

Query: 358 AHFTANQAILEAFHQKDIVHIVDLDIMHGLQWPALFHILATRPEGPPLVRLTGFGSSMEA 179
           AHFT+NQ+ILEAFH++D+VHI+DLDIM GLQWPALFHILATR EGPP +R+TG GSS+E 
Sbjct: 212 AHFTSNQSILEAFHRRDMVHIIDLDIMQGLQWPALFHILATRIEGPPHIRMTGMGSSIEL 271

Query: 178 LEETGRQLSTFAKRLGMSLEFHPVAKRSGDI-DPWMVQARRGETMAVHWLQHSLYDATG 5
           L +TG+QLS FA+RLG+S EFHPVAK+ G+I D   +Q RRGET+AVHWLQHSLYDATG
Sbjct: 272 LTQTGKQLSNFARRLGLSFEFHPVAKKFGEINDITSLQIRRGETLAVHWLQHSLYDATG 330


>ref|XP_002529844.1| DELLA protein GAIP, putative [Ricinus communis]
           gi|223530672|gb|EEF32545.1| DELLA protein GAIP, putative
           [Ricinus communis]
          Length = 519

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/118 (73%), Positives = 101/118 (85%)
 Frame = -2

Query: 358 AHFTANQAILEAFHQKDIVHIVDLDIMHGLQWPALFHILATRPEGPPLVRLTGFGSSMEA 179
           AHF +NQ ILEAF ++D VHI+DLDIM GLQWPALFHILATR EGPP +R+TG G+SM+ 
Sbjct: 244 AHFISNQEILEAFQRRDRVHIIDLDIMQGLQWPALFHILATRMEGPPHIRMTGMGTSMDL 303

Query: 178 LEETGRQLSTFAKRLGMSLEFHPVAKRSGDIDPWMVQARRGETMAVHWLQHSLYDATG 5
           L ETG+QLS FAKRLG+S EFHP+AK+ G+ID  MV  RRGET+AVHWLQHSLYDATG
Sbjct: 304 LVETGKQLSNFAKRLGLSFEFHPIAKKFGEIDVSMVPLRRGETLAVHWLQHSLYDATG 361


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