BLASTX nr result

ID: Dioscorea21_contig00036294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036294
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441218.1| hypothetical protein SORBIDRAFT_09g022536 [S...   101   7e-20
ref|XP_003576917.1| PREDICTED: uncharacterized protein LOC100839...   100   2e-19
ref|XP_002458177.1| hypothetical protein SORBIDRAFT_03g028285 [S...    98   8e-19
ref|XP_003581471.1| PREDICTED: putative nuclease HARBI1-like [Br...    97   1e-18
ref|XP_003572087.1| PREDICTED: putative nuclease HARBI1-like [Br...    97   1e-18

>ref|XP_002441218.1| hypothetical protein SORBIDRAFT_09g022536 [Sorghum bicolor]
           gi|241946503|gb|EES19648.1| hypothetical protein
           SORBIDRAFT_09g022536 [Sorghum bicolor]
          Length = 213

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   LRHASLRNHIERIIGVLKMRFPILKVATFHPIDSQTDIVVAACVLHNFIRIHNGTDEIEE 181
           LRHA LRNHIER IGVLKMR+PILK A+ + I++Q DI VA C+ HNFIR+HNG D +  
Sbjct: 101 LRHAQLRNHIERAIGVLKMRYPILKAASAYDIETQVDISVACCLTHNFIRLHNGDDSLVH 160

Query: 182 IS----NGGDEVNVPNGDDTYENDVNTMNS 259
            +    N  + ++VP GD  Y NDV   N+
Sbjct: 161 SATTDINDSNMIDVPEGDHQYNNDVPAFNN 190


>ref|XP_003576917.1| PREDICTED: uncharacterized protein LOC100839635 [Brachypodium
           distachyon]
          Length = 321

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/89 (53%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
 Frame = +2

Query: 2   LRHASLRNHIERIIGVLKMRFPILKVATFHPIDSQTDIVVAACVLHNFIRIHNGTDE-IE 178
           LRHA LRNH+ERIIGV+K RFPILK A+ +PIDSQ  I +A CVLHNFIR H G ++ ++
Sbjct: 199 LRHAQLRNHVERIIGVVKKRFPILKCASHYPIDSQASIAIACCVLHNFIRKHEGGEKWLD 258

Query: 179 EISNGGDE---VNVPNGDDTYENDVNTMN 256
           ++++  D    V++P+GD  Y +DV ++N
Sbjct: 259 KVASNIDPKHIVDIPSGDRQYRSDVQSLN 287


>ref|XP_002458177.1| hypothetical protein SORBIDRAFT_03g028285 [Sorghum bicolor]
           gi|241930152|gb|EES03297.1| hypothetical protein
           SORBIDRAFT_03g028285 [Sorghum bicolor]
          Length = 213

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   LRHASLRNHIERIIGVLKMRFPILKVATFHPIDSQTDIVVAACVLHNFIRIHNGTDEIEE 181
           LRHA LRNHIER IGVLKMR+PILK A+ + I++Q DI VA C+ HNFIR+HNG D +  
Sbjct: 101 LRHAQLRNHIERAIGVLKMRYPILKAASTYDIETQVDISVACCLTHNFIRLHNGDDSLVH 160

Query: 182 IS----NGGDEVNVPNGDDTYENDVNTMNS 259
            +    N  + ++VP G   Y NDV   N+
Sbjct: 161 GATTDINDSNMIDVPEGHHQYNNDVPAFNN 190


>ref|XP_003581471.1| PREDICTED: putative nuclease HARBI1-like [Brachypodium distachyon]
          Length = 333

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
 Frame = +2

Query: 2   LRHASLRNHIERIIGVLKMRFPILKVATFHPIDSQTDIVVAACVLHNFIRIHNG-----T 166
           LRHA LRNHIERIIG+ KMRFPILKVA+  P + Q DI VA  VLHNFIRIHNG     +
Sbjct: 217 LRHAQLRNHIERIIGIWKMRFPILKVASHFPKEKQIDISVACAVLHNFIRIHNGDMTWPS 276

Query: 167 DEIEEISNGGDEVNVPNGDDTYENDVNTMNS 259
           D   +I +    V+VPNGD +Y  D++  N+
Sbjct: 277 DATMDI-DPDQIVDVPNGDHSYHADIHAFNN 306


>ref|XP_003572087.1| PREDICTED: putative nuclease HARBI1-like [Brachypodium distachyon]
          Length = 377

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/91 (57%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
 Frame = +2

Query: 2   LRHASLRNHIERIIGVLKMRFPILKVATFHPIDSQTDIVVAACVLHNFIRIHNG-----T 166
           LRHA LRNHIERIIG+ KMRFPILKVA+  P + Q DI VA  VLHNFIRIHNG     +
Sbjct: 280 LRHAQLRNHIERIIGIWKMRFPILKVASHFPKEKQIDISVACAVLHNFIRIHNGDMTWPS 339

Query: 167 DEIEEISNGGDEVNVPNGDDTYENDVNTMNS 259
           D   +I +    V+VPNGD +Y  D++  N+
Sbjct: 340 DATMDI-DPDQIVDVPNGDHSYHADIHAFNN 369


Top