BLASTX nr result

ID: Dioscorea21_contig00036290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036290
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   134   1e-29
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   132   2e-29
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   130   2e-28
ref|XP_004172997.1| PREDICTED: ABC transporter C family member 1...   129   2e-28
ref|XP_004136033.1| PREDICTED: ABC transporter C family member 4...   129   2e-28

>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/145 (46%), Positives = 89/145 (61%)
 Frame = -3

Query: 435 YATATLLSKATWSWMNPLLAKGYKTPLHLHDVPSLAPEHQAETLLQTFNSHWPENNLRRN 256
           +A+A++LSKA W WMNPLL KGYK+PL + ++PSL+PEH+AE + + F S+WP+ + + N
Sbjct: 254 FASASILSKALWLWMNPLLGKGYKSPLKIDEIPSLSPEHRAERMSELFESNWPKPHEKLN 313

Query: 255 HHPVATSLFLSFWPNXXXXXXXXXXXXXAMYISPTLIQXXXXXXXXXXXXXSMAEGYYLC 76
            HPV T+LF  FW                +Y+ P LIQ                EGYYL 
Sbjct: 314 -HPVRTTLFRCFWREVAFTAFLAIVRLCVIYVGPLLIQRFVDFTSGKRSSPY--EGYYLV 370

Query: 75  SILLFSKLIEVLTSHQFNFQSQKLG 1
            ILL +K +EVLTSH FNF SQKLG
Sbjct: 371 LILLIAKTVEVLTSHHFNFNSQKLG 395


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/145 (46%), Positives = 88/145 (60%)
 Frame = -3

Query: 435 YATATLLSKATWSWMNPLLAKGYKTPLHLHDVPSLAPEHQAETLLQTFNSHWPENNLRRN 256
           +ATA+++SK+ W WMNPLL KGYK+PL + DVP+L+PEH+AE + Q F S WP+ +  ++
Sbjct: 253 FATASIISKSFWLWMNPLLRKGYKSPLKIDDVPTLSPEHRAEKMSQLFESSWPKPH-EKS 311

Query: 255 HHPVATSLFLSFWPNXXXXXXXXXXXXXAMYISPTLIQXXXXXXXXXXXXXSMAEGYYLC 76
           +HPV T+L   FW                MY+ P LIQ                EGYYL 
Sbjct: 312 NHPVRTTLLRCFWKEISFTAFLAILRLSVMYVGPMLIQSFVDYTSGKRTSPY--EGYYLV 369

Query: 75  SILLFSKLIEVLTSHQFNFQSQKLG 1
            ILL +K +EVLT HQFNF S+KLG
Sbjct: 370 LILLVAKFVEVLTDHQFNFNSRKLG 394


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  130 bits (326), Expect = 2e-28
 Identities = 68/151 (45%), Positives = 88/151 (58%)
 Frame = -3

Query: 453 EASPATYATATLLSKATWSWMNPLLAKGYKTPLHLHDVPSLAPEHQAETLLQTFNSHWPE 274
           E + + YA+A+  SK  W WMNPLL+KGYK+PL L +VP+L+PEH+AE L + F S WP+
Sbjct: 252 EDNVSLYASASAFSKMFWLWMNPLLSKGYKSPLTLEEVPTLSPEHKAERLARLFESSWPK 311

Query: 273 NNLRRNHHPVATSLFLSFWPNXXXXXXXXXXXXXAMYISPTLIQXXXXXXXXXXXXXSMA 94
            +   + HPV T+L   FW                MY+ P LIQ                
Sbjct: 312 PS-ENSSHPVRTTLLRCFWKEILYTAILAIVRLGVMYVGPVLIQSFVDFTSGKRSSSW-- 368

Query: 93  EGYYLCSILLFSKLIEVLTSHQFNFQSQKLG 1
           +GYYL  ILL +K +EVLT+HQFNF SQKLG
Sbjct: 369 QGYYLVLILLVAKFVEVLTTHQFNFDSQKLG 399


>ref|XP_004172997.1| PREDICTED: ABC transporter C family member 14-like, partial
           [Cucumis sativus]
          Length = 1188

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/155 (44%), Positives = 85/155 (54%)
 Frame = -3

Query: 465 QPAPEASPATYATATLLSKATWSWMNPLLAKGYKTPLHLHDVPSLAPEHQAETLLQTFNS 286
           +P  E++   YA+A+ LSK  W WMNPLL KGY  PL +  VPSL+PEH A T L  F S
Sbjct: 186 EPPNESNVTAYASASSLSKLLWLWMNPLLKKGYAAPLVIDQVPSLSPEHSAATRLAIFES 245

Query: 285 HWPENNLRRNHHPVATSLFLSFWPNXXXXXXXXXXXXXAMYISPTLIQXXXXXXXXXXXX 106
            WP+    R+ HPV T+LF  FW +              M++ P LIQ            
Sbjct: 246 KWPKPQ-ERSEHPVQTTLFWCFWKDILFTGVLAVIRLGVMFLGPALIQSFVDYTAGKRSS 304

Query: 105 XSMAEGYYLCSILLFSKLIEVLTSHQFNFQSQKLG 1
               EGYYL   L+F+K  EVLT+H FNF SQKLG
Sbjct: 305 PY--EGYYLILTLMFAKFFEVLTTHHFNFSSQKLG 337


>ref|XP_004136033.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 1495

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/155 (44%), Positives = 85/155 (54%)
 Frame = -3

Query: 465 QPAPEASPATYATATLLSKATWSWMNPLLAKGYKTPLHLHDVPSLAPEHQAETLLQTFNS 286
           +P  E++   YA+A+ LSK  W WMNPLL KGY  PL +  VPSL+PEH A T L  F S
Sbjct: 235 EPPNESNVTAYASASSLSKLLWLWMNPLLKKGYAAPLVIDQVPSLSPEHSAATRLAIFES 294

Query: 285 HWPENNLRRNHHPVATSLFLSFWPNXXXXXXXXXXXXXAMYISPTLIQXXXXXXXXXXXX 106
            WP+    R+ HPV T+LF  FW +              M++ P LIQ            
Sbjct: 295 KWPKPQ-ERSEHPVQTTLFWCFWKDILFTGVLAVIRLGVMFLGPALIQSFVDYTAGKRSS 353

Query: 105 XSMAEGYYLCSILLFSKLIEVLTSHQFNFQSQKLG 1
               EGYYL   L+F+K  EVLT+H FNF SQKLG
Sbjct: 354 PY--EGYYLILTLMFAKFFEVLTTHHFNFSSQKLG 386


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