BLASTX nr result

ID: Dioscorea21_contig00036286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036286
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...    62   9e-08
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
gb|EAY93965.1| hypothetical protein OsI_15743 [Oryza sativa Indi...    60   3e-07
emb|CAH66401.1| OSIGBa0155K12.4 [Oryza sativa Indica Group]            60   3e-07

>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   VEVGEFAAKRLWEMKVKDSGVYSAMANMYAGARRWGDVAKMRALMSHEKVI-KNAGSSSI 177
           +E+ E AAK++ E+K +D GVYS +AN+YA A RW DV K+R  MS  + + KNAG SSI
Sbjct: 454 IEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAVKKNAGRSSI 513


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
           gi|449479088|ref|XP_004155501.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 27/59 (45%), Positives = 42/59 (71%)
 Frame = +1

Query: 1   VEVGEFAAKRLWEMKVKDSGVYSAMANMYAGARRWGDVAKMRALMSHEKVIKNAGSSSI 177
           +E+GE+AA +L E+  ++ G Y+ ++N+YA ARRW DVA++R+LM H  + K  G S I
Sbjct: 668 IELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWI 726


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/62 (45%), Positives = 45/62 (72%)
 Frame = +1

Query: 1   VEVGEFAAKRLWEMKVKDSGVYSAMANMYAGARRWGDVAKMRALMSHEKVIKNAGSSSIL 180
           VE GE+ A+RL+E++ ++SG Y  ++N+YAGA RW DVAK+R  ++ + + K  G +SI 
Sbjct: 549 VEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIE 608

Query: 181 VD 186
           +D
Sbjct: 609 ID 610


>gb|EAY93965.1| hypothetical protein OsI_15743 [Oryza sativa Indica Group]
           gi|125590256|gb|EAZ30606.1| hypothetical protein
           OsJ_14659 [Oryza sativa Japonica Group]
          Length = 328

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +1

Query: 1   VEVGEFAAKRLWEMKVKDSGVYSAMANMYAGARRWGDVAKMRALMSHEKVIKNAGSSSIL 180
           VE  E AA+RL E+   D GVYSAMA +YA A RW DVA++R  M     ++N G SSI 
Sbjct: 258 VEFAEVAARRLLELNPDDGGVYSAMAGIYADAGRWEDVARVRRSMDEMVGMRNVGRSSIA 317

Query: 181 VD 186
           ++
Sbjct: 318 ME 319


>emb|CAH66401.1| OSIGBa0155K12.4 [Oryza sativa Indica Group]
          Length = 486

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/62 (50%), Positives = 40/62 (64%)
 Frame = +1

Query: 1   VEVGEFAAKRLWEMKVKDSGVYSAMANMYAGARRWGDVAKMRALMSHEKVIKNAGSSSIL 180
           VE  E AA+RL E+   D GVYSAMA +YA A RW DVA++R  M     ++N G SSI 
Sbjct: 416 VEFAEVAARRLLELNPDDGGVYSAMAGIYADAGRWEDVARVRRSMDEMVGMRNVGRSSIA 475

Query: 181 VD 186
           ++
Sbjct: 476 ME 477


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