BLASTX nr result

ID: Dioscorea21_contig00036281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036281
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    75   4e-12
emb|CBI34953.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...    73   2e-11
ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824...    73   3e-11
tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea m...    72   4e-11

>ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like
           [Glycine max]
          Length = 1707

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +3

Query: 120 MLFPAMSGKIDPAVLASLPPSMQLDLLVQMRERLMAENRQK 242
           M+ PAM GKIDPAVLASLPPSMQLDLLVQMRERL+AENRQK
Sbjct: 357 MILPAMHGKIDPAVLASLPPSMQLDLLVQMRERLIAENRQK 397


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 120 MLFPAMSGKIDPAVLASLPPSMQLDLLVQMRERLMAENRQK 242
           M+ P M+GK+DPAVLA+LPPSMQLDLLVQMRE+LMAENRQK
Sbjct: 203 MMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQK 243


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 120 MLFPAMSGKIDPAVLASLPPSMQLDLLVQMRERLMAENRQK 242
           M+ P M+GK+DPAVLA+LPPSMQLDLLVQMRE+LMAENRQK
Sbjct: 203 MMLPIMNGKVDPAVLAALPPSMQLDLLVQMREKLMAENRQK 243


>ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
           distachyon]
          Length = 1460

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 120 MLFPAMSGKIDPAVLASLPPSMQLDLLVQMRERLMAENRQK 242
           M+FP  +G IDPAVLASLPPSMQLDLLVQMRER+MAENRQK
Sbjct: 222 MIFPVTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQK 262


>tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
          Length = 1531

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 120 MLFPAMSGKIDPAVLASLPPSMQLDLLVQMRERLMAENRQK 242
           M+FP  +G IDPAVLASLPPSMQLDLLVQMRER+MAENRQK
Sbjct: 259 MIFPMTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQK 299


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