BLASTX nr result

ID: Dioscorea21_contig00036259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036259
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24253.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japo...    71   1e-10
gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indi...    71   1e-10
ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group] g...    71   1e-10

>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
 Frame = -3

Query: 435 LLLEMKNRGFVPTNHVLNCFLEEHLREGRVGKAMRFFEEMKGS-FNACTC--GVMVCGFV 265
           LLLEM+  G  P +      ++   ++GR+ +AM   E MK   F+A     G ++ GF 
Sbjct: 55  LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 114

Query: 264 SNGDIQMALSIMEEMVRKKMALSFDSYNAIVRGLCKCGRFEEAEEYVNRMVENGV---LV 94
           +NG++     + +EM+ K ++ +  +Y+ +V GLC+ G+++EA   +N M E+G+   +V
Sbjct: 115 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174

Query: 93  SYSAL 79
           +Y+ L
Sbjct: 175 TYTGL 179


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
 Frame = -3

Query: 435 LLLEMKNRGFVPTNHVLNCFLEEHLREGRVGKAMRFFEEMKGS-FNACTC--GVMVCGFV 265
           LLLEM+  G  P +      ++   ++GR+ +AM   E MK   F+A     G ++ GF 
Sbjct: 201 LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 260

Query: 264 SNGDIQMALSIMEEMVRKKMALSFDSYNAIVRGLCKCGRFEEAEEYVNRMVENGV---LV 94
           +NG++     + +EM+ K ++ +  +Y+ +V GLC+ G+++EA   +N M E+G+   +V
Sbjct: 261 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 320

Query: 93  SYSAL 79
           +Y+ L
Sbjct: 321 TYTGL 325


>gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
          Length = 318

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
 Frame = -3

Query: 426 EMKNRGFVPTNHVLNCFLEEHLREGRVGKAMRFFEEMKGSF---NACTCGVMVCGFVSNG 256
           EM ++G  P  +     +  + + G    A + ++EM G     +  +C ++V GF ++G
Sbjct: 160 EMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHG 219

Query: 255 DIQMALSIMEEMVRKKMALSFDSYNAIVRGLCKCGRFEEAEEYVNRMVENGVLVSYSALE 76
            +  AL + EEMV+K +     +YN +++GLCK GR  EA +   +++ +G+  S S   
Sbjct: 220 RVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFT 279

Query: 75  SLIEWM 58
            LI+ M
Sbjct: 280 PLIDTM 285


>gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
          Length = 473

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
 Frame = -3

Query: 426 EMKNRGFVPTNHVLNCFLEEHLREGRVGKAMRFFEEMKGSF---NACTCGVMVCGFVSNG 256
           EM ++G  P  +     +  + + G    A + ++EM G     +  +C ++V GF ++G
Sbjct: 315 EMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHG 374

Query: 255 DIQMALSIMEEMVRKKMALSFDSYNAIVRGLCKCGRFEEAEEYVNRMVENGVLVSYSALE 76
            +  AL + EEMV+K +     +YN +++GLCK GR  EA +   +++ +G+  S S   
Sbjct: 375 RVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFT 434

Query: 75  SLIEWM 58
            LI+ M
Sbjct: 435 PLIDTM 440


>ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
           gi|108708311|gb|ABF96106.1| pentatricopeptide, putative
           [Oryza sativa Japonica Group]
           gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa
           Japonica Group]
          Length = 564

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
 Frame = -3

Query: 426 EMKNRGFVPTNHVLNCFLEEHLREGRVGKAMRFFEEMKGSF---NACTCGVMVCGFVSNG 256
           EM ++G  P  +     +  + + G    A + ++EM G     +  +C ++V GF ++G
Sbjct: 315 EMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHG 374

Query: 255 DIQMALSIMEEMVRKKMALSFDSYNAIVRGLCKCGRFEEAEEYVNRMVENGVLVSYSALE 76
            +  AL + EEMV+K +     +YN +++GLCK GR  EA +   +++ +G+  S S   
Sbjct: 375 RVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFT 434

Query: 75  SLIEWM 58
            LI+ M
Sbjct: 435 PLIDTM 440


Top