BLASTX nr result

ID: Dioscorea21_contig00036249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036249
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444133.1| hypothetical protein SORBIDRAFT_07g009445 [S...    72   6e-11
ref|XP_002467535.1| hypothetical protein SORBIDRAFT_01g029735 [S...    67   2e-09
ref|XP_002450932.1| hypothetical protein SORBIDRAFT_05g021390 [S...    66   3e-09
gb|AAT01389.1| putative reverse transcriptase [Oryza sativa Japo...    66   3e-09
ref|XP_002447980.1| hypothetical protein SORBIDRAFT_06g019215 [S...    66   3e-09

>ref|XP_002444133.1| hypothetical protein SORBIDRAFT_07g009445 [Sorghum bicolor]
           gi|241940483|gb|EES13628.1| hypothetical protein
           SORBIDRAFT_07g009445 [Sorghum bicolor]
          Length = 222

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/81 (44%), Positives = 49/81 (60%)
 Frame = -3

Query: 254 KIFTDYFRNQFGNPMSNRFLLDWQNLFSHKDPVDLSSLDLPFNPVEIKLAVFELNADKSP 75
           KI  +YF N  G+  S +  L WQ L     P DLS L+LPF+  E+K  +  +  DK+P
Sbjct: 30  KIVMEYFSNHIGSTPSRQQTLAWQAL--GYTPQDLSELELPFSHDELKEVIHSMPIDKAP 87

Query: 74  GPDGFPIFFFQKHWNLIKDDI 12
           GPDGF   F++ +W +IKDDI
Sbjct: 88  GPDGFTGKFYKSYWQIIKDDI 108


>ref|XP_002467535.1| hypothetical protein SORBIDRAFT_01g029735 [Sorghum bicolor]
           gi|241921389|gb|EER94533.1| hypothetical protein
           SORBIDRAFT_01g029735 [Sorghum bicolor]
          Length = 707

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = -3

Query: 242 DYFRNQFGNPMSNRFLLDWQNLFSHKDPVDLSSLDLPFNPVEIKLAVFELNADKSPGPDG 63
           D+F+  FG P S    LD+Q L     PVDLS+LDLPF+  E++ AV +   D++PGPDG
Sbjct: 369 DHFKGVFGQPGSGSHTLDFQALGI--TPVDLSALDLPFSEEEVETAVRKKPPDRAPGPDG 426

Query: 62  FPIFFFQKHWNLIKDDI 12
           +   F++  W +IK DI
Sbjct: 427 YTGTFYKVAWPVIKPDI 443


>ref|XP_002450932.1| hypothetical protein SORBIDRAFT_05g021390 [Sorghum bicolor]
           gi|241936775|gb|EES09920.1| hypothetical protein
           SORBIDRAFT_05g021390 [Sorghum bicolor]
          Length = 1093

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = -3

Query: 242 DYFRNQFGNPMSNRFLLDWQNLFSHKDPVDLSSLDLPFNPVEIKLAVFELNADKSPGPDG 63
           D+FR  FG      F +D+Q +     P DLS+LDLPF+  EI++AV E+ +D++PGPDG
Sbjct: 351 DHFRGVFGQAGPASFTIDFQAIGI--SPSDLSALDLPFSEEEIEVAVREMPSDRAPGPDG 408

Query: 62  FPIFFFQKHWNLIKDDI 12
           F   F++  W  IK D+
Sbjct: 409 FTGLFYKSSWAHIKLDV 425


>gb|AAT01389.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 817

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = -3

Query: 251 IFTDYFRNQFGNPMSNRFLLDWQNLFSHKDPVDLSSLDLPFNPVEIKLAVFELNADKSPG 72
           +  ++F++  G P      L+W  L     P+DLS LD PF   EI  A+ E+ ADK+PG
Sbjct: 176 VIAEHFQHVMGQPEPRSCDLNWPEL--GYTPLDLSGLDDPFTEAEIHKAIKEMPADKAPG 233

Query: 71  PDGFPIFFFQKHWNLIKDDI 12
           PDGF   FF+  W +IK+D+
Sbjct: 234 PDGFTGKFFKSCWGIIKNDV 253


>ref|XP_002447980.1| hypothetical protein SORBIDRAFT_06g019215 [Sorghum bicolor]
           gi|241939163|gb|EES12308.1| hypothetical protein
           SORBIDRAFT_06g019215 [Sorghum bicolor]
          Length = 746

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = -3

Query: 242 DYFRNQFGNPMSNRFLLDWQNLFSHKDPVDLSSLDLPFNPVEIKLAVFELNADKSPGPDG 63
           D+FR  FG      F +D+Q +     P DLS+LD+PF+  E+++AV E+ +D++PGPDG
Sbjct: 351 DHFRGVFGQAGPASFTIDFQAIGI--SPTDLSALDMPFSEEEVEVAVREMPSDRAPGPDG 408

Query: 62  FPIFFFQKHWNLIKDDI 12
           F   F++  W  IK D+
Sbjct: 409 FTGLFYKSSWPHIKLDV 425


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