BLASTX nr result

ID: Dioscorea21_contig00036223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036223
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...    96   2e-18
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]    96   3e-18
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    91   1e-16

>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/90 (53%), Positives = 58/90 (64%)
 Frame = +2

Query: 8   FRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYLT 187
           FRRML  GL PD   LPTA K+  +LSSLPL   LHALS+ + H    FV SSL+  Y  
Sbjct: 96  FRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAK 155

Query: 188 CNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
           C  +  A  +FD MPH+N+VSWS MI GY+
Sbjct: 156 CGDVNLARKVFDEMPHKNVVSWSGMIYGYS 185


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 8   FRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYLT 187
           F +ML+ GL PD  VLP+AVKA   LS+L   RQ+H ++  SG  S  FV SSL+HMY+ 
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161

Query: 188 CNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
           CN+I DAH +FD M   ++VSWS+++A YA
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = +2

Query: 5   LFRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYL 184
           LFR M  +G+ P+   +P  + A  ++++L  G+  H  S+  G S+  +V S+LI MY 
Sbjct: 373 LFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYA 432

Query: 185 TCNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
            C RI  + + FD +P +NLV W+++IAGYA
Sbjct: 433 KCGRIQASRICFDGIPTKNLVCWNAVIAGYA 463


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 8   FRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYLT 187
           F +ML+ GL PD  VLP+AVKA   LS+L   RQ+H ++  SG  S  FV SSL+HMY+ 
Sbjct: 102 FSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIK 161

Query: 188 CNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
           CN+I DAH +FD M   ++VSWS+++A YA
Sbjct: 162 CNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = +2

Query: 5   LFRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYL 184
           LFR M  +G+ P+   +P  + A  ++++L  G+  H  S+  G S+  +V S+LI MY 
Sbjct: 373 LFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYA 432

Query: 185 TCNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
            C RI  + + FD +P +NLV W+++IAGYA
Sbjct: 433 KCGRIQASRICFDGIPTKNLVCWNAVIAGYA 463


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/82 (54%), Positives = 59/82 (71%)
 Frame = +2

Query: 32  LPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYLTCNRITDAH 211
           L PD F+LP+A+K+  SL +L  G+QLHA + +SG  +   V SSL HMYL C+RI DA 
Sbjct: 100 LIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDAR 159

Query: 212 LLFDAMPHRNLVSWSSMIAGYA 277
            LFD MP R++V WS+MIAGY+
Sbjct: 160 KLFDRMPDRDVVVWSAMIAGYS 181



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = +2

Query: 5   LFRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYL 184
           LFR M + G+ P+   +P+ + A  ++S+L  G+++H  S+  G     +V S+LI MY 
Sbjct: 363 LFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA 422

Query: 185 TCNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
            C RI  A   FD M   NLVSW++++ GYA
Sbjct: 423 KCGRIQLARRCFDKMSALNLVSWNAVMKGYA 453


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/90 (48%), Positives = 57/90 (63%)
 Frame = +2

Query: 8   FRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYLT 187
           FRRML+ G+ PD  + P+A KA   L    +G+ +H L++ +G+    FV SSL+ MY  
Sbjct: 114 FRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAK 173

Query: 188 CNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
           C  I DA  LFD MP RN+VSWS MI GYA
Sbjct: 174 CGEIGDARHLFDEMPERNVVSWSGMIYGYA 203



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +2

Query: 5   LFRRMLSSGLPPDPFVLPTAVKASFSLSSLPLGRQLHALSISSGHSSHPFVHSSLIHMYL 184
           LF++ L   +  + F   + ++   S + L LG+ +H L +     S  FV S+LI +Y 
Sbjct: 214 LFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYS 273

Query: 185 TCNRITDAHLLFDAMPHRNLVSWSSMIAGYA 277
            C  I  A+ +FD +P RNL  W+SM+   A
Sbjct: 274 KCGVIEGAYQVFDEIPTRNLGLWNSMLIACA 304


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