BLASTX nr result

ID: Dioscorea21_contig00036197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036197
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564771.1| PREDICTED: acyl-[acyl-carrier-protein] desat...    80   1e-13
ref|XP_002456738.1| hypothetical protein SORBIDRAFT_03g041700 [S...    77   1e-12
gb|AFW84383.1| hypothetical protein ZEAMMB73_694203, partial [Ze...    76   2e-12
ref|NP_001141697.2| uncharacterized protein LOC100273826 [Zea ma...    76   2e-12
ref|XP_004162898.1| PREDICTED: LOW QUALITY PROTEIN: acyl-[acyl-c...    75   7e-12

>ref|XP_003564771.1| PREDICTED: acyl-[acyl-carrier-protein] desaturase 1,
           chloroplastic-like [Brachypodium distachyon]
          Length = 379

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 7/74 (9%)
 Frame = +2

Query: 35  MQAHFL----AGQRVSPPL--HRRSPVSAV-LDPPQLRRKVTHSLPPEKAEVFRNLEGWA 193
           MQAH +    A     PPL  H   PVSA  + PP  +R+VTHS+PPEKAEVFR+L+GWA
Sbjct: 1   MQAHAIVRAPAHHHHLPPLSRHHCRPVSAAAVAPPPTQRRVTHSMPPEKAEVFRSLQGWA 60

Query: 194 TRNLLPLLKPVEKC 235
           T++LLPLLKPVE C
Sbjct: 61  TQSLLPLLKPVEDC 74


>ref|XP_002456738.1| hypothetical protein SORBIDRAFT_03g041700 [Sorghum bicolor]
           gi|241928713|gb|EES01858.1| hypothetical protein
           SORBIDRAFT_03g041700 [Sorghum bicolor]
          Length = 380

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
 Frame = +2

Query: 35  MQAHFLAGQRVSP--PLHRRS------PVSAVLDPPQLRRKVTHSLPPEKAEVFRNLEGW 190
           MQAH +A +  +P  P H R         +A +  P  R +VTHS+PPEKAEVFR+LEGW
Sbjct: 1   MQAHGIAVRARAPVAPAHARRRRQCRVSATAAVAAPAARARVTHSMPPEKAEVFRSLEGW 60

Query: 191 ATRNLLPLLKPVEKC 235
           A R+LLPLLKPVE+C
Sbjct: 61  AARSLLPLLKPVEEC 75


>gb|AFW84383.1| hypothetical protein ZEAMMB73_694203, partial [Zea mays]
          Length = 205

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
 Frame = +2

Query: 35  MQAHFLAGQRVSPPLHRRSPV--------SAVLDPPQLRRKVTHSLPPEKAEVFRNLEGW 190
           MQAH +A +   P    ++P         +A +  P  R +VTHS+PPEKAEVFR+LEGW
Sbjct: 1   MQAHGIAIRARGPVAATQAPARRRQCRVSAAAVGAPAARARVTHSMPPEKAEVFRSLEGW 60

Query: 191 ATRNLLPLLKPVEKC 235
           A R+LLPLLKPVE+C
Sbjct: 61  AARSLLPLLKPVEEC 75


>ref|NP_001141697.2| uncharacterized protein LOC100273826 [Zea mays]
           gi|195659169|gb|ACG49052.1| acyl-desaturase [Zea mays]
           gi|238908897|gb|ACF86878.2| unknown [Zea mays]
           gi|413951735|gb|AFW84384.1| acyl-desaturase [Zea mays]
          Length = 380

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
 Frame = +2

Query: 35  MQAHFLAGQRVSPPLHRRSPV--------SAVLDPPQLRRKVTHSLPPEKAEVFRNLEGW 190
           MQAH +A +   P    ++P         +A +  P  R +VTHS+PPEKAEVFR+LEGW
Sbjct: 1   MQAHGIAIRARGPVAATQAPARRRQCRVSAAAVGAPAARARVTHSMPPEKAEVFRSLEGW 60

Query: 191 ATRNLLPLLKPVEKC 235
           A R+LLPLLKPVE+C
Sbjct: 61  AARSLLPLLKPVEEC 75


>ref|XP_004162898.1| PREDICTED: LOW QUALITY PROTEIN: acyl-[acyl-carrier-protein]
           desaturase 6, chloroplastic-like [Cucumis sativus]
          Length = 387

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/56 (57%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
 Frame = +2

Query: 71  PPLHR-RSPVSAVLDPPQLRRKVTHSLPPEKAEVFRNLEGWATRNLLPLLKPVEKC 235
           PPL+R +SP+SA+  PP ++ +  HS+PPEK +VF++LEGWA  N+LPLLKPV+ C
Sbjct: 24  PPLYRLKSPISAIAAPPLVKHRRMHSMPPEKIDVFKSLEGWANDNVLPLLKPVDDC 79


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