BLASTX nr result

ID: Dioscorea21_contig00036189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036189
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    64   1e-08
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    64   1e-08
ref|XP_002463010.1| hypothetical protein SORBIDRAFT_02g036185 [S...    61   1e-07
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    60   1e-07

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/142 (31%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
 Frame = +1

Query: 1    IVNGSWNLEALNMLFGPNWESPLTSFGQICYESK-NHWTWSQKVKGNKL--SANVYNFLN 171
            I N  WN+E LN LF P WES       +  + K + W W     G     SA  +  L 
Sbjct: 976  ISNDRWNVELLNTLFQP-WESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLE 1034

Query: 172  VKFGHPVAWNG-----WANIWKLSIAPKVKSFIWLLMHGKIKTYDYLYFLNLGPPNPCIF 336
             +   P    G     W  IWK  I PKVK F W  +H  +  Y  +    +     C  
Sbjct: 1035 DRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPR 1094

Query: 337  CGLILESVHHLFSQCSFSIRVW 402
            CG   E+  HL   C  S R W
Sbjct: 1095 CGEKEETTEHLIWGCDESSRAW 1116


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/68 (35%), Positives = 41/68 (60%)
 Frame = +1

Query: 205 WANIWKLSIAPKVKSFIWLLMHGKIKTYDYLYFLNLGPPNPCIFCGLILESVHHLFSQCS 384
           W++IW+L + PK+K+F+W +  G + T + L    +  P  C+ C    E V HLF  C+
Sbjct: 168 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 227

Query: 385 FSIRVWRM 408
           F ++VW++
Sbjct: 228 FDVQVWQL 235


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/68 (35%), Positives = 41/68 (60%)
 Frame = +1

Query: 205 WANIWKLSIAPKVKSFIWLLMHGKIKTYDYLYFLNLGPPNPCIFCGLILESVHHLFSQCS 384
           W++IW+L + PK+K+F+W +  G + T + L    +  P  C+ C    E V HLF  C+
Sbjct: 261 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 320

Query: 385 FSIRVWRM 408
           F ++VW++
Sbjct: 321 FDVQVWQL 328


>ref|XP_002463010.1| hypothetical protein SORBIDRAFT_02g036185 [Sorghum bicolor]
           gi|241926387|gb|EER99531.1| hypothetical protein
           SORBIDRAFT_02g036185 [Sorghum bicolor]
          Length = 544

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
 Frame = +1

Query: 46  GPNWESPLTSFGQICYESK---------NHWTWSQKVKGNKLSANVYNFLNVKFGHPVAW 198
           GP     +  F Q+C E +         + +TWS     +  +A+ Y+ +      P+  
Sbjct: 337 GPRSLRLIAEFVQLCREIERVHLMPGVPDTFTWSLTSCQSYSAASAYSAMFFGCSKPL-- 394

Query: 199 NGWANIWKLSIAPKVKSFIWLLMHGKIKTYDYLYFLNLGPPNPCIFCGLILESVHHLFSQ 378
            G A IWK    P+VK F WL +HGK  T D  +   L   N CI C    E++ H+   
Sbjct: 395 -GAALIWKTPAPPRVKFFFWLALHGKCWTADRRWRHGLQDDNSCITCDQSAETLDHIILG 453

Query: 379 CSFSIRVW 402
           C FS  VW
Sbjct: 454 CVFSKEVW 461


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
 Frame = +1

Query: 115 WSQKVKGNKLSANVYNFLNVKFGHPVAWNGWAN-IWKLSIAPKVKSFIWLLMHGKIKTYD 291
           W+    G+ +  + Y F N     PV  + WA  IW   I P      W L+H K+ T +
Sbjct: 86  WNHNSNGDLMMRDSYAFKN----QPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDE 141

Query: 292 YLYFLNLGPPNPCIFCGLILESVHHLFSQCSFSIRVW 402
            L       P+ C  CG  +E+  HLF +C F+ R+W
Sbjct: 142 KLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIW 178


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