BLASTX nr result

ID: Dioscorea21_contig00036178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036178
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446485.1| hypothetical protein SORBIDRAFT_06g016730 [S...    79   4e-13
tpg|DAA37788.1| TPA: putative ubiquitin carboxyl-terminal hydrol...    78   9e-13
tpg|DAA37787.1| TPA: putative ubiquitin carboxyl-terminal hydrol...    78   9e-13
ref|NP_001132083.1| uncharacterized protein LOC100193497 [Zea ma...    78   9e-13
ref|NP_001173940.1| Os04g0429200 [Oryza sativa Japonica Group] g...    76   2e-12

>ref|XP_002446485.1| hypothetical protein SORBIDRAFT_06g016730 [Sorghum bicolor]
           gi|241937668|gb|EES10813.1| hypothetical protein
           SORBIDRAFT_06g016730 [Sorghum bicolor]
          Length = 286

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/62 (61%), Positives = 48/62 (77%)
 Frame = -3

Query: 187 IYYVAGLQNLGSNCFLNVIMQALASCSCFYPFLQNILIDGDLLLDQKPEKMPLRVALTSL 8
           +YYV GL+NLG+NCFLNVI+QALASC  F  FL N+L    LL ++K  +MPL +AL+SL
Sbjct: 62  VYYVGGLRNLGNNCFLNVILQALASCGGFISFLDNLLATDGLLPEEKAVRMPLLLALSSL 121

Query: 7   LE 2
           LE
Sbjct: 122 LE 123


>tpg|DAA37788.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 236

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = -3

Query: 184 YYVAGLQNLGSNCFLNVIMQALASCSCFYPFLQNILIDGDLLLDQKPEKMPLRVALTSLL 5
           YYV GL+NLG+NCFLNVI+QALASC  F  FL N+L    LL ++K  +MPL +AL+SLL
Sbjct: 63  YYVGGLRNLGNNCFLNVILQALASCDGFISFLDNLLATDGLLPEEKAVRMPLLLALSSLL 122

Query: 4   E 2
           E
Sbjct: 123 E 123


>tpg|DAA37787.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
           protein [Zea mays]
          Length = 131

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = -3

Query: 184 YYVAGLQNLGSNCFLNVIMQALASCSCFYPFLQNILIDGDLLLDQKPEKMPLRVALTSLL 5
           YYV GL+NLG+NCFLNVI+QALASC  F  FL N+L    LL ++K  +MPL +AL+SLL
Sbjct: 63  YYVGGLRNLGNNCFLNVILQALASCDGFISFLDNLLATDGLLPEEKAVRMPLLLALSSLL 122

Query: 4   E 2
           E
Sbjct: 123 E 123


>ref|NP_001132083.1| uncharacterized protein LOC100193497 [Zea mays]
           gi|194693372|gb|ACF80770.1| unknown [Zea mays]
           gi|224033593|gb|ACN35872.1| unknown [Zea mays]
           gi|414587218|tpg|DAA37789.1| TPA: putative ubiquitin
           carboxyl-terminal hydrolase superfamily protein [Zea
           mays]
          Length = 504

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = -3

Query: 184 YYVAGLQNLGSNCFLNVIMQALASCSCFYPFLQNILIDGDLLLDQKPEKMPLRVALTSLL 5
           YYV GL+NLG+NCFLNVI+QALASC  F  FL N+L    LL ++K  +MPL +AL+SLL
Sbjct: 63  YYVGGLRNLGNNCFLNVILQALASCDGFISFLDNLLATDGLLPEEKAVRMPLLLALSSLL 122

Query: 4   E 2
           E
Sbjct: 123 E 123


>ref|NP_001173940.1| Os04g0429200 [Oryza sativa Japonica Group]
           gi|255675466|dbj|BAH92668.1| Os04g0429200 [Oryza sativa
           Japonica Group]
          Length = 145

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = -3

Query: 199 SSEFIYYVAGLQNLGSNCFLNVIMQALASCSCFYPFLQNILIDGDLLLDQKPEKMPLRVA 20
           +S+ +YY  GL+NLG+NCFLNVI+QALASC  F   L N+L   D+L ++K EKMPL  A
Sbjct: 56  NSDRLYYTGGLKNLGNNCFLNVILQALASCDGFVSSLDNLLGSEDVLPEEKSEKMPLIFA 115

Query: 19  LTSLLE 2
           L+SL++
Sbjct: 116 LSSLIK 121


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