BLASTX nr result
ID: Dioscorea21_contig00036168
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00036168 (382 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002873012.1| LMBR1 integral membrane family protein [Arab... 182 3e-44 ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia... 181 4e-44 ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arab... 181 5e-44 ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi... 181 7e-44 ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-lik... 180 1e-43 >ref|XP_002873012.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297318849|gb|EFH49271.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp. lyrata] Length = 509 Score = 182 bits (461), Expect = 3e-44 Identities = 90/126 (71%), Positives = 96/126 (76%) Frame = +3 Query: 3 VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182 VKAV DVN LEEMYPQGEQAETAW TVLGY+ K ILG LG IVSVAWIAHI Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGILGLIVSVAWIAHI 349 Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362 +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT VIAG MMLGL+LVFITI Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLSVIAGAMMLGLKLVFITI 409 Query: 363 HPMKWG 380 HPMKWG Sbjct: 410 HPMKWG 415 >ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana] gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR family protein At5g01460 gi|7320724|emb|CAB81929.1| putative protein [Arabidopsis thaliana] gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis thaliana] gi|20465353|gb|AAM20080.1| unknown protein [Arabidopsis thaliana] gi|332002964|gb|AED90347.1| LMBR1-like membrane protein [Arabidopsis thaliana] Length = 509 Score = 181 bits (460), Expect = 4e-44 Identities = 89/126 (70%), Positives = 96/126 (76%) Frame = +3 Query: 3 VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182 VKAV DVN LEEMYPQGEQAETAW TVLGY+ K +LG LG IVSVAWIAHI Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFVLGILGLIVSVAWIAHI 349 Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362 +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT VIAG MMLGL+LVFITI Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITI 409 Query: 363 HPMKWG 380 HPMKWG Sbjct: 410 HPMKWG 415 >ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata] gi|297328430|gb|EFH58849.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata] Length = 509 Score = 181 bits (459), Expect = 5e-44 Identities = 88/126 (69%), Positives = 96/126 (76%) Frame = +3 Query: 3 VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182 VKAV DVN LEEMYPQGEQAETAW TVLGY+ K ILG LG IVS+AW+AHI Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGILGLIVSIAWVAHI 349 Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362 +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT VIAG MMLGL+LVFITI Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITI 409 Query: 363 HPMKWG 380 HPMKWG Sbjct: 410 HPMKWG 415 >ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera] gi|297740207|emb|CBI30389.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 181 bits (458), Expect = 7e-44 Identities = 90/126 (71%), Positives = 97/126 (76%) Frame = +3 Query: 3 VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182 VKAV +DV LEEMYPQGE+AET W LTVLGY+ KL+LG LG IVSVAWIAHI Sbjct: 290 VKAVEKELLQLEDDVKALEEMYPQGEKAETTWALTVLGYLAKLVLGILGLIVSVAWIAHI 349 Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362 VIYLLIDPPLSPFLNEVFI+LDD+WGLLGT VIAG MMLGL+LVFITI Sbjct: 350 VIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITI 409 Query: 363 HPMKWG 380 HPMKWG Sbjct: 410 HPMKWG 415 >ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus] gi|449522716|ref|XP_004168372.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus] Length = 509 Score = 180 bits (456), Expect = 1e-43 Identities = 89/126 (70%), Positives = 96/126 (76%) Frame = +3 Query: 3 VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182 VKAV DV LEEMYPQGE+AETAW LTVLGY+ KL+LG LG IVSVAW+ HI Sbjct: 290 VKAVEKELLQLEEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGVLGLIVSVAWVVHI 349 Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362 VIYLLIDPPLSPFLNEVFI+LDD+WGLLGT VIAG MMLGL+LVFITI Sbjct: 350 VIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITI 409 Query: 363 HPMKWG 380 HPMKWG Sbjct: 410 HPMKWG 415