BLASTX nr result

ID: Dioscorea21_contig00036168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036168
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873012.1| LMBR1 integral membrane family protein [Arab...   182   3e-44
ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia...   181   4e-44
ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arab...   181   5e-44
ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi...   181   7e-44
ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-lik...   180   1e-43

>ref|XP_002873012.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318849|gb|EFH49271.1| LMBR1 integral
           membrane family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 509

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/126 (71%), Positives = 96/126 (76%)
 Frame = +3

Query: 3   VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182
           VKAV         DVN LEEMYPQGEQAETAW  TVLGY+ K ILG LG IVSVAWIAHI
Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGILGLIVSVAWIAHI 349

Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362
           +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT             VIAG MMLGL+LVFITI
Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLSVIAGAMMLGLKLVFITI 409

Query: 363 HPMKWG 380
           HPMKWG
Sbjct: 410 HPMKWG 415


>ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana]
           gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR
           family protein At5g01460 gi|7320724|emb|CAB81929.1|
           putative protein [Arabidopsis thaliana]
           gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis
           thaliana] gi|20465353|gb|AAM20080.1| unknown protein
           [Arabidopsis thaliana] gi|332002964|gb|AED90347.1|
           LMBR1-like membrane protein [Arabidopsis thaliana]
          Length = 509

 Score =  181 bits (460), Expect = 4e-44
 Identities = 89/126 (70%), Positives = 96/126 (76%)
 Frame = +3

Query: 3   VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182
           VKAV         DVN LEEMYPQGEQAETAW  TVLGY+ K +LG LG IVSVAWIAHI
Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFVLGILGLIVSVAWIAHI 349

Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362
           +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT             VIAG MMLGL+LVFITI
Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITI 409

Query: 363 HPMKWG 380
           HPMKWG
Sbjct: 410 HPMKWG 415


>ref|XP_002882590.1| hypothetical protein ARALYDRAFT_478196 [Arabidopsis lyrata subsp.
           lyrata] gi|297328430|gb|EFH58849.1| hypothetical protein
           ARALYDRAFT_478196 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/126 (69%), Positives = 96/126 (76%)
 Frame = +3

Query: 3   VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182
           VKAV         DVN LEEMYPQGEQAETAW  TVLGY+ K ILG LG IVS+AW+AHI
Sbjct: 290 VKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTVLGYLAKFILGILGLIVSIAWVAHI 349

Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362
           +IYLL+DPPLSPFLNEVFI+LDD+WGLLGT             VIAG MMLGL+LVFITI
Sbjct: 350 IIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITI 409

Query: 363 HPMKWG 380
           HPMKWG
Sbjct: 410 HPMKWG 415


>ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera]
           gi|297740207|emb|CBI30389.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score =  181 bits (458), Expect = 7e-44
 Identities = 90/126 (71%), Positives = 97/126 (76%)
 Frame = +3

Query: 3   VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182
           VKAV        +DV  LEEMYPQGE+AET W LTVLGY+ KL+LG LG IVSVAWIAHI
Sbjct: 290 VKAVEKELLQLEDDVKALEEMYPQGEKAETTWALTVLGYLAKLVLGILGLIVSVAWIAHI 349

Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362
           VIYLLIDPPLSPFLNEVFI+LDD+WGLLGT             VIAG MMLGL+LVFITI
Sbjct: 350 VIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITI 409

Query: 363 HPMKWG 380
           HPMKWG
Sbjct: 410 HPMKWG 415


>ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus]
           gi|449522716|ref|XP_004168372.1| PREDICTED: LIMR family
           protein At3g08930-like [Cucumis sativus]
          Length = 509

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/126 (70%), Positives = 96/126 (76%)
 Frame = +3

Query: 3   VKAVXXXXXXXXNDVNTLEEMYPQGEQAETAWILTVLGYMGKLILGTLGAIVSVAWIAHI 182
           VKAV         DV  LEEMYPQGE+AETAW LTVLGY+ KL+LG LG IVSVAW+ HI
Sbjct: 290 VKAVEKELLQLEEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGVLGLIVSVAWVVHI 349

Query: 183 VIYLLIDPPLSPFLNEVFIQLDDIWGLLGTXXXXXXXXXXXXXVIAGEMMLGLQLVFITI 362
           VIYLLIDPPLSPFLNEVFI+LDD+WGLLGT             VIAG MMLGL+LVFITI
Sbjct: 350 VIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITI 409

Query: 363 HPMKWG 380
           HPMKWG
Sbjct: 410 HPMKWG 415


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