BLASTX nr result

ID: Dioscorea21_contig00036163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036163
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
emb|CBI21495.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...    83   2e-14
gb|AAM62516.1| unknown [Arabidopsis thaliana]                          63   3e-08
ref|NP_201300.1| Mitochondrial transcription termination factor ...    62   4e-08

>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/83 (51%), Positives = 61/83 (73%)
 Frame = +3

Query: 6   EDPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSR 185
           ++P  +L+ N++FL+ +C I  SQL MLL RQP LF+M++SAL+DL  ++  MG SV+SR
Sbjct: 158 KNPKSRLLSNVAFLE-SCGIVGSQLSMLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSR 216

Query: 186 MFALALYSFSCMSSETFKKKFDL 254
           M   ALY+ SCMS ETF KK ++
Sbjct: 217 MLVYALYTVSCMSHETFGKKIEI 239


>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +3

Query: 24  LIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRMFALAL 203
           L+ NI+FL+ +C I  SQL MLL RQP LFV++QS L+DL  R  +MG S++SRM   AL
Sbjct: 170 LLSNIAFLE-SCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYAL 228

Query: 204 YSFSCMSSETFKKKFDL 254
           Y+ SC+  ET +KKF+L
Sbjct: 229 YTISCLRDETLRKKFEL 245


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +3

Query: 24  LIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRMFALAL 203
           L+ NI+FL+ +C I  SQL MLL RQP LFV++QS L+DL  R  +MG S++SRM   AL
Sbjct: 189 LLSNIAFLE-SCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYAL 247

Query: 204 YSFSCMSSETFKKKFDL 254
           Y+ SC+  ET +KKF+L
Sbjct: 248 YTISCLRDETLRKKFEL 264


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/82 (42%), Positives = 51/82 (62%)
 Frame = +3

Query: 9   DPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRM 188
           DP L L+PNIS+L+ TC I  SQL  LL RQP +F + +  L+    R  ++G +++SRM
Sbjct: 176 DPNLFLLPNISYLE-TCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRM 234

Query: 189 FALALYSFSCMSSETFKKKFDL 254
              A+ S S +S +TF +K  L
Sbjct: 235 LVHAIISLSSLSEKTFDRKVKL 256


>ref|NP_201300.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010591|gb|AED97974.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 391

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/82 (42%), Positives = 51/82 (62%)
 Frame = +3

Query: 9   DPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRM 188
           DP L L+PNIS+L+ TC I  SQL  LL RQP +F + +  L+    R  ++G +++SRM
Sbjct: 176 DPNLFLLPNISYLE-TCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRM 234

Query: 189 FALALYSFSCMSSETFKKKFDL 254
              A+ S S +S +TF +K  L
Sbjct: 235 LVHAVISLSSLSEKTFDRKVKL 256


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