BLASTX nr result
ID: Dioscorea21_contig00036163
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00036163 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm... 85 7e-15 emb|CBI21495.3| unnamed protein product [Vitis vinifera] 83 2e-14 ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268... 83 2e-14 gb|AAM62516.1| unknown [Arabidopsis thaliana] 63 3e-08 ref|NP_201300.1| Mitochondrial transcription termination factor ... 62 4e-08 >ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis] gi|223527293|gb|EEF29446.1| conserved hypothetical protein [Ricinus communis] Length = 366 Score = 84.7 bits (208), Expect = 7e-15 Identities = 43/83 (51%), Positives = 61/83 (73%) Frame = +3 Query: 6 EDPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSR 185 ++P +L+ N++FL+ +C I SQL MLL RQP LF+M++SAL+DL ++ MG SV+SR Sbjct: 158 KNPKSRLLSNVAFLE-SCGIVGSQLSMLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSR 216 Query: 186 MFALALYSFSCMSSETFKKKFDL 254 M ALY+ SCMS ETF KK ++ Sbjct: 217 MLVYALYTVSCMSHETFGKKIEI 239 >emb|CBI21495.3| unnamed protein product [Vitis vinifera] Length = 369 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/77 (54%), Positives = 56/77 (72%) Frame = +3 Query: 24 LIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRMFALAL 203 L+ NI+FL+ +C I SQL MLL RQP LFV++QS L+DL R +MG S++SRM AL Sbjct: 170 LLSNIAFLE-SCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYAL 228 Query: 204 YSFSCMSSETFKKKFDL 254 Y+ SC+ ET +KKF+L Sbjct: 229 YTISCLRDETLRKKFEL 245 >ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera] Length = 388 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/77 (54%), Positives = 56/77 (72%) Frame = +3 Query: 24 LIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRMFALAL 203 L+ NI+FL+ +C I SQL MLL RQP LFV++QS L+DL R +MG S++SRM AL Sbjct: 189 LLSNIAFLE-SCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYAL 247 Query: 204 YSFSCMSSETFKKKFDL 254 Y+ SC+ ET +KKF+L Sbjct: 248 YTISCLRDETLRKKFEL 264 >gb|AAM62516.1| unknown [Arabidopsis thaliana] Length = 391 Score = 62.8 bits (151), Expect = 3e-08 Identities = 35/82 (42%), Positives = 51/82 (62%) Frame = +3 Query: 9 DPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRM 188 DP L L+PNIS+L+ TC I SQL LL RQP +F + + L+ R ++G +++SRM Sbjct: 176 DPNLFLLPNISYLE-TCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRM 234 Query: 189 FALALYSFSCMSSETFKKKFDL 254 A+ S S +S +TF +K L Sbjct: 235 LVHAIISLSSLSEKTFDRKVKL 256 >ref|NP_201300.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gi|332010591|gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 391 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/82 (42%), Positives = 51/82 (62%) Frame = +3 Query: 9 DPALKLIPNISFLKKTCHIDPSQLLMLLVRQPSLFVMRQSALQDLAHRITEMGVSVDSRM 188 DP L L+PNIS+L+ TC I SQL LL RQP +F + + L+ R ++G +++SRM Sbjct: 176 DPNLFLLPNISYLE-TCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRM 234 Query: 189 FALALYSFSCMSSETFKKKFDL 254 A+ S S +S +TF +K L Sbjct: 235 LVHAVISLSSLSEKTFDRKVKL 256