BLASTX nr result
ID: Dioscorea21_contig00036151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00036151
(278 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group] g... 127 7e-28
gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indi... 127 7e-28
ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containi... 125 4e-27
ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [S... 120 1e-25
>ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa
Japonica Group] gi|125601219|gb|EAZ40795.1| hypothetical
protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 127 bits (320), Expect = 7e-28
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = +2
Query: 8 ARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFR 187
ARPN++VQCAL+DMFAKCG LD+AR VFE M RDL +WT MIGGT+ G W E + LF
Sbjct: 190 ARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFN 249
Query: 188 RMRLEGFGLDSVILATVIPACGRLADVRLG 277
MR EGFG+DS+I ATVI ACGR ++++G
Sbjct: 250 HMRSEGFGVDSLIAATVISACGRAGELQVG 279
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +2
Query: 5 GARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLF 184
GA +IYV AL+DM+ KCG ++ A +F +D+VSW+ +I G Q G + ++SLF
Sbjct: 290 GASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLF 349
Query: 185 RRMRLEGFGLDSVILATVIPACGRLADVRLG 277
M G +S LA+++P L +R G
Sbjct: 350 CEMISLGINPNSSTLASILPCLSVLKLIRSG 380
>gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 127 bits (320), Expect = 7e-28
Identities = 57/90 (63%), Positives = 70/90 (77%)
Frame = +2
Query: 8 ARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFR 187
ARPN++VQCAL+DMFAKCG LD+AR VFE M RDL +WT MIGGT+ G W E + LF
Sbjct: 185 ARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFN 244
Query: 188 RMRLEGFGLDSVILATVIPACGRLADVRLG 277
MR EGFG+DS+I ATVI ACGR ++++G
Sbjct: 245 HMRSEGFGVDSLIAATVISACGRAGELQVG 274
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +2
Query: 5 GARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLF 184
GA +IYV AL+DM+ KCG ++ A +F +D+VSW+ +I G Q G + ++SLF
Sbjct: 285 GASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLF 344
Query: 185 RRMRLEGFGLDSVILATVIPACGRLADVRLG 277
M G +S LA+++P L +R G
Sbjct: 345 CEMISLGINPNSSTLASILPCLSVLKLIRSG 375
>ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 125 bits (314), Expect = 4e-27
Identities = 57/88 (64%), Positives = 71/88 (80%)
Frame = +2
Query: 14 PNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFRRM 193
P+++VQCAL+DMFAKCG L +AR+VFE M ERDL +WT MIGG + G+W +A+SLF RM
Sbjct: 179 PSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRM 238
Query: 194 RLEGFGLDSVILATVIPACGRLADVRLG 277
R EGF DSVI+ATVIPACGR ++R G
Sbjct: 239 RSEGFLADSVIIATVIPACGRAKELRTG 266
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 23 YVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFRRMRLE 202
++ A ID +++ GS+ +A V E MP+RDLV W M+ G G AL FR ++
Sbjct: 384 FLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKV 443
Query: 203 GFGLDSVILATVIPAC 250
GF D V + +V+P C
Sbjct: 444 GFRPDHVTVVSVLPVC 459
>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 125 bits (313), Expect = 5e-27
Identities = 59/89 (66%), Positives = 73/89 (82%)
Frame = +2
Query: 11 RPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFRR 190
+ N+YVQCA+IDMFAKCGS++DAR +FEEMP+RDL SWT +I GTM GE EAL LFR+
Sbjct: 164 KANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRK 223
Query: 191 MRLEGFGLDSVILATVIPACGRLADVRLG 277
MR EG DSVI+A+++PACGRL V+LG
Sbjct: 224 MRSEGLMPDSVIVASILPACGRLEAVKLG 252
Score = 61.6 bits (148), Expect = 6e-08
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +2
Query: 5 GARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLF 184
G ++YV A+IDM+ KCG +A VF M D+VSW+ +I G Q + E+ L+
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLY 322
Query: 185 RRMRLEGFGLDSVILATVIPACGRLADVRLG 277
M G ++++ +V+PA G+L ++ G
Sbjct: 323 IGMINVGLATNAIVATSVLPALGKLELLKQG 353
Score = 55.8 bits (133), Expect = 3e-06
Identities = 27/92 (29%), Positives = 51/92 (55%)
Frame = +2
Query: 2 DGARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSL 181
+G ++ V ALI M+A CGS+ +A ++FE ++D++ W MI G G++ A
Sbjct: 363 EGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFT 422
Query: 182 FRRMRLEGFGLDSVILATVIPACGRLADVRLG 277
FRR+ + + + +++P C ++ +R G
Sbjct: 423 FRRIWGAEHRPNFITVVSILPICTQMGALRQG 454
>ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein
SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 120 bits (301), Expect = 1e-25
Identities = 54/90 (60%), Positives = 71/90 (78%)
Frame = +2
Query: 8 ARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFR 187
A+ N++VQCAL+DMFAKCG L +AR VFE M RDL +WT MIGGT+ G+W E ++L +
Sbjct: 180 AKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLK 239
Query: 188 RMRLEGFGLDSVILATVIPACGRLADVRLG 277
RM+ EGF DS+ILATVIPACG++ ++R G
Sbjct: 240 RMKSEGFRPDSMILATVIPACGKVKELRTG 269
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +2
Query: 35 ALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSLFRRMRLEGFGL 214
AL+DM+ KC LD A ++F + +D++SW+ +I G Q + ++SLF M G
Sbjct: 290 ALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKP 349
Query: 215 DSVILATVIPACGRLADVRLG 277
+S LA+++P+ L R G
Sbjct: 350 NSTTLASILPSLSELRLFRYG 370
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +2
Query: 2 DGARPNIYVQCALIDMFAKCGSLDDARTVFEEMPERDLVSWTRMIGGTMQQGEWSEALSL 181
+G + ++ ALID +++ GS+ +A VFE P+ DLV MIGG + + AL L
Sbjct: 380 NGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRL 439
Query: 182 FRRMRLEGFGLDSVILATVIPACGR 256
R + EG D V + +V+P C +
Sbjct: 440 LRALLKEGLRPDRVTVVSVLPLCNQ 464