BLASTX nr result

ID: Dioscorea21_contig00036129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036129
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD01248.1| putative F-box protein [Oryza sativa Japonica Gr...   202   2e-50
gb|EEE68266.1| hypothetical protein OsJ_26492 [Oryza sativa Japo...   202   2e-50
gb|EEC83139.1| hypothetical protein OsI_28324 [Oryza sativa Indi...   202   2e-50
ref|XP_002445255.1| hypothetical protein SORBIDRAFT_07g006910 [S...   193   1e-47
gb|AFW57058.1| hypothetical protein ZEAMMB73_592868 [Zea mays]        192   3e-47

>dbj|BAD01248.1| putative F-box protein [Oryza sativa Japonica Group]
           gi|38175700|dbj|BAD01409.1| putative F-box protein
           [Oryza sativa Japonica Group]
          Length = 448

 Score =  202 bits (515), Expect = 2e-50
 Identities = 90/142 (63%), Positives = 115/142 (80%)
 Frame = -1

Query: 437 LLDIGREPPEWMEVKYDNSNIPSEMPLPRVGHSATLIIGGRVLIYGGEDSQRHRKNDFWI 258
           LLDI    P+W E+KYD S++  EMP PRVGHSATL++GG++L+YGGEDSQR RK+DFW 
Sbjct: 307 LLDINERYPKWKELKYDLSSVLGEMPFPRVGHSATLVLGGKILVYGGEDSQRRRKDDFWT 366

Query: 257 LDVGSLSRFQAMGLKRPPKIWKKLRLEGHCPSYRSFHGACTDQSGHNVFIFGGMVDGVIH 78
           LD+ +L +F++   K   ++WKKLR++G CP+YRSFHGAC D SG +V+IFGGMVDG++H
Sbjct: 367 LDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACVDTSGCHVYIFGGMVDGLVH 426

Query: 77  PAEAYGLRFDGELYHVKLVLQL 12
           PAEA GLRFDG+LY V LVL L
Sbjct: 427 PAEASGLRFDGQLYQVDLVLHL 448


>gb|EEE68266.1| hypothetical protein OsJ_26492 [Oryza sativa Japonica Group]
          Length = 450

 Score =  202 bits (515), Expect = 2e-50
 Identities = 90/142 (63%), Positives = 115/142 (80%)
 Frame = -1

Query: 437 LLDIGREPPEWMEVKYDNSNIPSEMPLPRVGHSATLIIGGRVLIYGGEDSQRHRKNDFWI 258
           LLDI    P+W E+KYD S++  EMP PRVGHSATL++GG++L+YGGEDSQR RK+DFW 
Sbjct: 309 LLDINERYPKWKELKYDLSSVLGEMPFPRVGHSATLVLGGKILVYGGEDSQRRRKDDFWT 368

Query: 257 LDVGSLSRFQAMGLKRPPKIWKKLRLEGHCPSYRSFHGACTDQSGHNVFIFGGMVDGVIH 78
           LD+ +L +F++   K   ++WKKLR++G CP+YRSFHGAC D SG +V+IFGGMVDG++H
Sbjct: 369 LDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACVDTSGCHVYIFGGMVDGLVH 428

Query: 77  PAEAYGLRFDGELYHVKLVLQL 12
           PAEA GLRFDG+LY V LVL L
Sbjct: 429 PAEASGLRFDGQLYQVDLVLHL 450


>gb|EEC83139.1| hypothetical protein OsI_28324 [Oryza sativa Indica Group]
          Length = 448

 Score =  202 bits (515), Expect = 2e-50
 Identities = 90/142 (63%), Positives = 115/142 (80%)
 Frame = -1

Query: 437 LLDIGREPPEWMEVKYDNSNIPSEMPLPRVGHSATLIIGGRVLIYGGEDSQRHRKNDFWI 258
           LLDI    P+W E+KYD S++  EMP PRVGHSATL++GG++L+YGGEDSQR RK+DFW 
Sbjct: 307 LLDINERYPKWKELKYDLSSVLGEMPFPRVGHSATLVLGGKILVYGGEDSQRRRKDDFWT 366

Query: 257 LDVGSLSRFQAMGLKRPPKIWKKLRLEGHCPSYRSFHGACTDQSGHNVFIFGGMVDGVIH 78
           LD+ +L +F++   K   ++WKKLR++G CP+YRSFHGAC D SG +V+IFGGMVDG++H
Sbjct: 367 LDLPALLQFESGSKKMTKRMWKKLRIDGQCPNYRSFHGACVDTSGCHVYIFGGMVDGLVH 426

Query: 77  PAEAYGLRFDGELYHVKLVLQL 12
           PAEA GLRFDG+LY V LVL L
Sbjct: 427 PAEASGLRFDGQLYQVDLVLHL 448


>ref|XP_002445255.1| hypothetical protein SORBIDRAFT_07g006910 [Sorghum bicolor]
           gi|241941605|gb|EES14750.1| hypothetical protein
           SORBIDRAFT_07g006910 [Sorghum bicolor]
          Length = 476

 Score =  193 bits (490), Expect = 1e-47
 Identities = 87/142 (61%), Positives = 111/142 (78%)
 Frame = -1

Query: 437 LLDIGREPPEWMEVKYDNSNIPSEMPLPRVGHSATLIIGGRVLIYGGEDSQRHRKNDFWI 258
           L DI  + P+W E+KYD S+   E+P PRVGHSA L +GG+VL+YGGEDSQ  RK+DFWI
Sbjct: 335 LFDISDQYPKWKELKYDLSSALGELPFPRVGHSAILALGGKVLVYGGEDSQMRRKDDFWI 394

Query: 257 LDVGSLSRFQAMGLKRPPKIWKKLRLEGHCPSYRSFHGACTDQSGHNVFIFGGMVDGVIH 78
           LD  +L ++++   K   K+WKKLR++G CP+YRSFHGAC D SG  V+IFGGMVDG++H
Sbjct: 395 LDTPALLQYESGSKKMTKKMWKKLRIDGQCPNYRSFHGACVDTSGCCVYIFGGMVDGLVH 454

Query: 77  PAEAYGLRFDGELYHVKLVLQL 12
           PAEA+GLRFDG LY V+L+L L
Sbjct: 455 PAEAWGLRFDGHLYQVELLLHL 476


>gb|AFW57058.1| hypothetical protein ZEAMMB73_592868 [Zea mays]
          Length = 468

 Score =  192 bits (487), Expect = 3e-47
 Identities = 86/142 (60%), Positives = 111/142 (78%)
 Frame = -1

Query: 437 LLDIGREPPEWMEVKYDNSNIPSEMPLPRVGHSATLIIGGRVLIYGGEDSQRHRKNDFWI 258
           L DI  + P+W E+KY  S+   E+P PRVGHSA L++GG+VL+YGGEDSQR RK+DFWI
Sbjct: 327 LFDISDQYPKWKELKYGLSSALGELPFPRVGHSAILVLGGKVLVYGGEDSQRRRKDDFWI 386

Query: 257 LDVGSLSRFQAMGLKRPPKIWKKLRLEGHCPSYRSFHGACTDQSGHNVFIFGGMVDGVIH 78
           LD  +L ++++   K   K+WKKLR++G CP+YRSFHGAC D SG  V+IFGGMVDG++H
Sbjct: 387 LDTPALLQYESGSKKMTRKMWKKLRIDGQCPNYRSFHGACVDASGCCVYIFGGMVDGLVH 446

Query: 77  PAEAYGLRFDGELYHVKLVLQL 12
           P+EA G+RFDG LY V+LVL L
Sbjct: 447 PSEALGMRFDGHLYQVELVLHL 468


Top