BLASTX nr result

ID: Dioscorea21_contig00036126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036126
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               60   2e-07
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    55   4e-06
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    55   8e-06

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/44 (56%), Positives = 35/44 (79%)
 Frame = -2

Query: 232 QRRNPPFYTRSVKLDFPRFEGEDVLNWIYKAEQFFRYYQIPLAE 101
           +++   F  RSVKLDFPRF+G++V++WI+KAEQFF YY  P A+
Sbjct: 87  EQQRSSFQVRSVKLDFPRFDGKNVMDWIFKAEQFFDYYATPDAD 130


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/46 (52%), Positives = 31/46 (67%)
 Frame = -2

Query: 226 RNPPFYTRSVKLDFPRFEGEDVLNWIYKAEQFFRYYQIPLAEIPHH 89
           RN    TR+V+LDFP+F GED   W+Y+A+QFF Y+Q      PHH
Sbjct: 45  RNGGIQTRAVRLDFPKFNGEDPSGWVYRADQFFNYHQTN----PHH 86


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
 Frame = -2

Query: 376 EQREERMNLMEQTLHTMSKCLETLQIAKSVPPMEGSSPVRIELMEEVDQRR--NPPF--- 212
           EQ ++  N ++Q +  ++  LE   +A +V  +            E  +R+  NP F   
Sbjct: 24  EQYQQNHNSLQQVVEGLAHQLEV--VASNVQTLVQMKTKHNSGDSEGSKRQMTNPLFEDN 81

Query: 211 ---YTRSVKLDFPRFEGEDVLNWIYKAEQFFRYYQIPLAEIPHH 89
               TR+V+LDFP+F GED   W+Y+A+QFF Y+Q      PHH
Sbjct: 82  GGIQTRAVRLDFPKFNGEDPNGWVYRADQFFNYHQTN----PHH 121


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