BLASTX nr result

ID: Dioscorea21_contig00036123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036123
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528940.1| conserved hypothetical protein [Ricinus comm...   101   7e-20
ref|XP_002301269.1| GRAS family transcription factor [Populus tr...   100   9e-20
ref|XP_003629479.1| GRAS family transcription factor [Medicago t...   100   2e-19
emb|CBI38908.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vi...    99   5e-19

>ref|XP_002528940.1| conserved hypothetical protein [Ricinus communis]
           gi|223531642|gb|EEF33469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
 Frame = -3

Query: 414 LDSLDSAALATGLGDDPVRRIERFLIRPRVTSWV----QACGAHPTPWRETLASAGFSPA 247
           L+SLD+  +A+    D V +IE+FL++PR+ S V    +A    PT W+   ASAGFSP 
Sbjct: 685 LESLDAVNVAS----DAVNKIEKFLLQPRIESTVLGRLRAPDKMPT-WKTIFASAGFSPV 739

Query: 246 PFSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWRC 103
            FS FTE+QAE +++R PV GFHV +R  ++VL W+ RDL S SAWRC
Sbjct: 740 TFSNFTETQAECVVKRTPVRGFHVEKRQASLVLCWQRRDLISASAWRC 787


>ref|XP_002301269.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222842995|gb|EEE80542.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 732

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
 Frame = -3

Query: 414 LDSLDSAALATGLGDDPVRRIERFLIRPRVTSWV---QACGAHPTPWRETLASAGFSPAP 244
           L+SLD    A  +  D V++IERFL++P +   V    +C     PWR     +GF+P  
Sbjct: 630 LESLD----AVNVNLDAVQKIERFLVQPGIEKTVLGRHSCPDRTPPWRSLFLQSGFTPLT 685

Query: 243 FSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWRC 103
           FS FTESQAE+L++R PV GFHV +R  ++VL W+ +DL S SAWRC
Sbjct: 686 FSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQHKDLVSASAWRC 732


>ref|XP_003629479.1| GRAS family transcription factor [Medicago truncatula]
           gi|355523501|gb|AET03955.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 542

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/104 (47%), Positives = 66/104 (63%)
 Frame = -3

Query: 414 LDSLDSAALATGLGDDPVRRIERFLIRPRVTSWVQACGAHPTPWRETLASAGFSPAPFSE 235
           L+SLD A++A G G +  RRIE  L+RP++ + V+A G   TPWRE    AG  P   S+
Sbjct: 440 LESLD-ASVAAGGGGEWARRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQ 498

Query: 234 FTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWRC 103
           F + QAE LL +  + GFHVA+R   +VL W  R + +TSAWRC
Sbjct: 499 FADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC 542


>emb|CBI38908.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
 Frame = -3

Query: 414 LDSLDSAALATGLGDDPVRRIERFLIRPRVTSWVQACGAHPT---PWRETLASAGFSPAP 244
           L+SLD    A  +  D +++IERFL++P +   V      P    PWR  L S+GFSP  
Sbjct: 471 LESLD----AVNVNSDALQKIERFLLQPGIEKIVLGRHRSPEKTPPWRALLLSSGFSPLT 526

Query: 243 FSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWRC 103
           FS F+ESQAE L++R PV GFHV +R  ++VL W+ +DL S SAWRC
Sbjct: 527 FSNFSESQAECLVKRTPVRGFHVEKRQSSLVLCWQRKDLISASAWRC 573


>ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vitis vinifera]
          Length = 804

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
 Frame = -3

Query: 414  LDSLDSAALATGLGDDPVRRIERFLIRPRVTSWVQACGAHPT---PWRETLASAGFSPAP 244
            L+SLD    A  +  D +++IERFL++P +   V      P    PWR  L S+GFSP  
Sbjct: 702  LESLD----AVNVNSDALQKIERFLLQPGIEKIVLGRHRSPEKTPPWRALLLSSGFSPLT 757

Query: 243  FSEFTESQAEWLLRRAPVDGFHVARRDGAMVLSWKGRDLASTSAWRC 103
            FS F+ESQAE L++R PV GFHV +R  ++VL W+ +DL S SAWRC
Sbjct: 758  FSNFSESQAECLVKRTPVRGFHVEKRQSSLVLCWQRKDLISASAWRC 804


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