BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036093
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522354.1| pentatricopeptide repeat-containing protein,...    84   2e-14
ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_003611834.1| Pentatricopeptide repeat-containing protein ...    79   4e-13
ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538432|gb|EEF40038.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 704

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
 Frame = +2

Query: 2   LASLATLLSKSISPN-IRKARQLHAFILT---STXXXXXXXXXXXXXXXYSKCGSFSDAR 169
           +  L  L+ K  + N ++KARQLHA IL    ST               Y+ CGS SDA+
Sbjct: 4   ICCLEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRSDAQ 63

Query: 170 KLFDRMHTRSLVSYNTMISSYSRDSRHTVAAFNLFRHLSVAGLNPNASTFSSLI 331
           KLFDRM  ++ +SYN +I++Y RDS +   +F LF  + +  L PN +TF+SL+
Sbjct: 64  KLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLL 117


>ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 696

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
 Frame = +2

Query: 8   SLATLLSKSIS-PNIRKARQLHAFILTS--TXXXXXXXXXXXXXXXYSKCGSFSDARKLF 178
           SL+ L+ K IS  +++ ARQLHA ILTS  T               Y++CG+  +++K+F
Sbjct: 6   SLSALVQKCISVTSLKAARQLHALILTSIATASSLSPYVCNNILSMYARCGAIWESQKVF 65

Query: 179 DRMHTRSLVSYNTMISSYSRDSRHTVAAFNLFRHLSVAGLNPNASTFSSLILAA 340
           ++M  R+LVS+N +I++YSR   H   AFNL   + +  L PN+ T +SL+ AA
Sbjct: 66  EKMPQRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFLKPNSFTITSLLQAA 119


>ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513169|gb|AES94792.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 985

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = +2

Query: 17  TLLSKS--ISPNIRKARQLHAFILTSTXXXXXXXXXXXXXXX--YSKCGSFSDARKLFDR 184
           TLL K   I+ ++++ARQLHA +LT+T                 YS+CGS  DA ++FD+
Sbjct: 283 TLLLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDK 342

Query: 185 MHTRSLVSYNTMISSYSRDS-RHTVAAFNLFRHLSVAGLNPNASTFSSLILAA 340
           M  R+ VSYN ++++YSR S +H V AFNL+  +   GL P+  T +SL+ AA
Sbjct: 343 MPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAA 395


>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = +2

Query: 8   SLATLLSKSISPNIRKARQLHAFILTSTXXXXXXXXXXXXXXX--YSKCGSFSDARKLFD 181
           +L+ L   S   ++R+ARQLHA ILT+T                 Y++CGS +D+  +FD
Sbjct: 13  ALSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFD 72

Query: 182 RMHTRSLVSYNTMISSYSRDS-RHTVAAFNLFRHLSVAGLNPNASTFSSLILAA 340
           +M  R++VSYN ++++YSR S  H ++A  L+  +   GL P+++TF+SL+ A+
Sbjct: 73  KMPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQAS 126


>ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 690

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = +2

Query: 17  TLLSKSIS-PNIRKARQLHAFILTS--TXXXXXXXXXXXXXXXYSKCGSFSDARKLFDRM 187
           +L+ K IS  +++ ARQLHA ILTS  T               Y++CG+  +++K+F++M
Sbjct: 39  SLVQKCISVTSLKAARQLHALILTSIATASSLSPYVCNNILSMYARCGAIWESQKVFEKM 98

Query: 188 HTRSLVSYNTMISSYSRDSRHTVAAFNLFRHLSVAGLNPNASTFSSLILAA 340
             R+LVS+N +I++YSR   H   AFNL   + +  L PN+ T +SL+ AA
Sbjct: 99  PQRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFLKPNSFTITSLLQAA 149