BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036086
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    92   3e-17
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    92   3e-17
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    92   6e-17
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    91   7e-17
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    91   1e-16

>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 290 LPPPWGRTHVVLIPKKANPSVVTEFRPISLCNVKYKIITKILANRLKLILPTLVGREQAG 111
           LP  W  TH+ LIPK   P+ + + RPISLC+V YKII+KIL+ RLK  LP +V   Q+ 
Sbjct: 209 LPEDWNHTHLCLIPKITKPARMADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSA 268

Query: 110 FVAGRSPFDNIVTMHEVAHSLET-DGLSPPRMIVKVD 3
           FVA R   DNI+  HE+ H+L T + +S   M+ K D
Sbjct: 269 FVAERLVSDNIILAHEIVHNLRTNEKISKDFMVFKTD 305


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1319

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = -1

Query: 290 LPPPWGRTHVVLIPKKANPSVVTEFRPISLCNVKYKIITKILANRLKLILPTLVGREQAG 111
           LP  W  TH+ LIPK  NP  +++ RPISLC+V YKII+KIL+ +LK  LP++V   Q+ 
Sbjct: 432 LPQEWNHTHLYLIPKFTNPQRMSDIRPISLCSVLYKIISKILSFKLKKHLPSIVSPSQSA 491

Query: 110 FVAGRSPFDNIVTMHEVAHSLET-DGLSPPRMIVKVD 3
           F A R   DNI+  HE+ HSL T D +S   M+ K D
Sbjct: 492 FFAERLISDNILIAHEIVHSLRTNDKISKEFMVFKTD 528


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = -1

Query: 290 LPPPWGRTHVVLIPKKANPSVVTEFRPISLCNVKYKIITKILANRLKLILPTLVGREQAG 111
           LP  W  TH+ LIPK  +P  +++ RPISLC+V YKII+KIL  RLK  LP +V   Q+ 
Sbjct: 479 LPQDWNHTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSA 538

Query: 110 FVAGRSPFDNIVTMHEVAHSLET-DGLSPPRMIVKVD 3
           FV  R   DNI+  HE+ HSL T D +S   M  K D
Sbjct: 539 FVPQRLISDNILVAHEMIHSLRTNDRISKEHMAFKTD 575


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = -1

Query: 287 PPPWGRTHVVLIPKKANPSVVTEFRPISLCNVKYKIITKILANRLKLILPTLVGREQAGF 108
           P  W  TH+ L+PKK  P  +T+ RPISLC+V YKII+KI+  RL+  LP LV   Q+ F
Sbjct: 483 PKSWNFTHLCLLPKKKKPDKMTDLRPISLCSVLYKIISKIMVRRLQPFLPDLVSPNQSAF 542

Query: 107 VAGRSPFDNIVTMHEVAHSLET 42
           VA R  FDNI+  HEV H L T
Sbjct: 543 VAERLIFDNILIAHEVVHGLRT 564


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 58/82 (70%)
 Frame = -1

Query: 290 LPPPWGRTHVVLIPKKANPSVVTEFRPISLCNVKYKIITKILANRLKLILPTLVGREQAG 111
           +P  W  T VV+IPK   P  VT+FRPISLCNV YKII+K+LANRLK +LP ++  +Q+ 
Sbjct: 343 IPDGWNDTTVVMIPKVDKPDRVTQFRPISLCNVVYKIISKMLANRLKCLLPEIISDQQSA 402

Query: 110 FVAGRSPFDNIVTMHEVAHSLE 45
           FV GR   DN++  +E  H+++
Sbjct: 403 FVPGRLITDNVLVAYECLHTMK 424