BLASTX nr result

ID: Dioscorea21_contig00036075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036075
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   171   6e-41
emb|CBI30660.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   166   2e-39
ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38

>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/110 (73%), Positives = 95/110 (86%)
 Frame = -3

Query: 332 CGRTEDARIVFNQMPEKNVFSWTSMIDGYGKNGNPHEALALFYEMKKYTNVKPNYATFLG 153
           CGR EDAR VFN MP +NVFSWTSMIDGYGKNG P EAL LF+ M++  N++PNY TFLG
Sbjct: 328 CGRIEDARRVFNYMPVRNVFSWTSMIDGYGKNGEPWEALELFHRMQQ-CNIEPNYVTFLG 386

Query: 152 ALSACGHAGLVLEGQDIFNSMEREYSLKPRMEHYACVVYLLGRMGSLQEA 3
           ALSACGHAGLV +G++IF+SMER+YS KPRMEHYAC+V LLGR G+LQ+A
Sbjct: 387 ALSACGHAGLVTKGREIFDSMERDYSTKPRMEHYACMVDLLGRAGNLQQA 436


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/110 (74%), Positives = 90/110 (81%)
 Frame = -3

Query: 332 CGRTEDARIVFNQMPEKNVFSWTSMIDGYGKNGNPHEALALFYEMKKYTNVKPNYATFLG 153
           CGR EDAR VF+ MPEKNVFSWTSMIDGYGKNGN +EAL LF  M+   +VKPNY TFL 
Sbjct: 330 CGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLS 389

Query: 152 ALSACGHAGLVLEGQDIFNSMEREYSLKPRMEHYACVVYLLGRMGSLQEA 3
           ALSACGHAGLV +G  I  SMER+Y LKPRMEHYAC+V LLGR GSLQ+A
Sbjct: 390 ALSACGHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLLGRAGSLQQA 439


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/110 (74%), Positives = 90/110 (81%)
 Frame = -3

Query: 332 CGRTEDARIVFNQMPEKNVFSWTSMIDGYGKNGNPHEALALFYEMKKYTNVKPNYATFLG 153
           CGR EDAR VF+ MPEKNVFSWTSMIDGYGKNGN +EAL LF  M+   +VKPNY TFL 
Sbjct: 330 CGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLS 389

Query: 152 ALSACGHAGLVLEGQDIFNSMEREYSLKPRMEHYACVVYLLGRMGSLQEA 3
           ALSACGHAGLV +G  I  SMER+Y LKPRMEHYAC+V LLGR GSLQ+A
Sbjct: 390 ALSACGHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLLGRAGSLQQA 439


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/110 (73%), Positives = 91/110 (82%)
 Frame = -3

Query: 332 CGRTEDARIVFNQMPEKNVFSWTSMIDGYGKNGNPHEALALFYEMKKYTNVKPNYATFLG 153
           CGR EDAR  F QMPEKNVFSW+SMIDGYGKNG P EAL LF++M+    ++PNY TFLG
Sbjct: 328 CGRIEDARRAFEQMPEKNVFSWSSMIDGYGKNGRPDEALQLFHKMQDCC-IEPNYVTFLG 386

Query: 152 ALSACGHAGLVLEGQDIFNSMEREYSLKPRMEHYACVVYLLGRMGSLQEA 3
           ALSACGHAGLV +G++IF SMEREYSLKP MEHYAC+V LLGR GSL  A
Sbjct: 387 ALSACGHAGLVSKGREIFESMEREYSLKPGMEHYACMVDLLGRAGSLNLA 436


>ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Cucumis sativus]
          Length = 523

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/110 (70%), Positives = 90/110 (81%)
 Frame = -3

Query: 332 CGRTEDARIVFNQMPEKNVFSWTSMIDGYGKNGNPHEALALFYEMKKYTNVKPNYATFLG 153
           CGRT+DAR VF+QM E+NVFSWTSMIDGYGKNG P EAL LF  M++   ++PN+ TFL 
Sbjct: 320 CGRTDDARQVFDQMQERNVFSWTSMIDGYGKNGYPSEALELFCIMQEKHQIQPNFVTFLS 379

Query: 152 ALSACGHAGLVLEGQDIFNSMEREYSLKPRMEHYACVVYLLGRMGSLQEA 3
           ALSAC H GLV EG +IF SMER+YSLKP+MEHYAC+V LLGR GSL +A
Sbjct: 380 ALSACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLLGRAGSLLQA 429


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