BLASTX nr result

ID: Dioscorea21_contig00036029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036029
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001294337.1| ATP synthase CF1 alpha subunit [Dioscorea el...    75   6e-12
ref|YP_004769615.1| ATP synthase CF1 alpha subunit (chloroplast)...    69   4e-10
gb|AEJ10081.1| ATP synthase CF1 alpha subunit [Kingia australis]...    69   5e-10
ref|YP_007475946.1| ATP synthase CF1 alpha subunit [Bismarckia n...    67   1e-09
ref|YP_007475774.1| ATP synthase CF1 alpha subunit [Pseudophoeni...    67   1e-09

>ref|YP_001294337.1| ATP synthase CF1 alpha subunit [Dioscorea elephantipes]
           gi|190358172|sp|A6MMJ2.1|ATPA_DIOEL RecName: Full=ATP
           synthase subunit alpha, chloroplastic; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha gi|148668031|gb|ABR01415.1| ATP synthase
           CF1 alpha subunit [Dioscorea elephantipes]
          Length = 507

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 2   KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 115
           KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA
Sbjct: 456 KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 493


>ref|YP_004769615.1| ATP synthase CF1 alpha subunit (chloroplast) [Spirodela polyrhiza]
           gi|341834056|gb|AEK94327.1| ATP synthase CF1 alpha
           subunit [Spirodela polyrhiza]
          Length = 507

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 115
           KFLVQLRTYLKKNK QFKEIISSTKTFT+EAEALLK A
Sbjct: 456 KFLVQLRTYLKKNKPQFKEIISSTKTFTQEAEALLKEA 493


>gb|AEJ10081.1| ATP synthase CF1 alpha subunit [Kingia australis]
           gi|392841323|gb|AFM83278.1| ATP synthase CF1 alpha
           subunit (chloroplast) [Kingia australis]
          Length = 507

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/38 (92%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 115
           KFLVQLRTYLKKNK QF+EIISSTKTFTEEAEALLK A
Sbjct: 456 KFLVQLRTYLKKNKPQFQEIISSTKTFTEEAEALLKEA 493


>ref|YP_007475946.1| ATP synthase CF1 alpha subunit [Bismarckia nobilis]
           gi|449326429|gb|AGE93011.1| ATP synthase CF1 alpha
           subunit [Bismarckia nobilis]
          Length = 514

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 115
           KFLVQLRTYLKKNK QF+EIISSTKTFTEEAEALL+ A
Sbjct: 456 KFLVQLRTYLKKNKPQFQEIISSTKTFTEEAEALLREA 493


>ref|YP_007475774.1| ATP synthase CF1 alpha subunit [Pseudophoenix vinifera]
           gi|449326255|gb|AGE92839.1| ATP synthase CF1 alpha
           subunit [Pseudophoenix vinifera]
          Length = 514

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   KFLVQLRTYLKKNKSQFKEIISSTKTFTEEAEALLKGA 115
           KFLVQLRTYLKKNK QF+EIISSTKTFTE+AEALLK A
Sbjct: 456 KFLVQLRTYLKKNKPQFQEIISSTKTFTEQAEALLKEA 493


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