BLASTX nr result

ID: Dioscorea21_contig00036008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00036008
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UD...   182   4e-44
gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]    179   3e-43
ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D...   175   5e-42
ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirs...   169   3e-40

>ref|XP_002523143.1| Cellulose synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis] gi|223537705|gb|EEF39328.1| Cellulose
           synthase A catalytic subunit 3 [UDP-forming], putative
           [Ricinus communis]
          Length = 1162

 Score =  182 bits (462), Expect = 4e-44
 Identities = 104/205 (50%), Positives = 124/205 (60%), Gaps = 15/205 (7%)
 Frame = +3

Query: 3   ASPVTITISSGGRGAAEGAMGSSRSMGLTSPAPRHSLPNNLHSPVTASHPXXXXXXXXXX 182
           +SPVTIT+SSGG+         SRSMGLTSP PR S+ NN +SP+T S            
Sbjct: 10  SSPVTITVSSGGKERG------SRSMGLTSPVPRASISNNPNSPLTNSK----NRTSSGG 59

Query: 183 XYCPASASRDEGSEA-TSEFVHYTVHIPPTPDHQPLP------------SPKRSFISGTI 323
            YC  S SRD+ +E   S+FV YTVHIPPTPDHQP+              P RSFISGTI
Sbjct: 60  RYC--SMSRDDTTEEINSDFVTYTVHIPPTPDHQPMSVSQSSLDIKNDGKPDRSFISGTI 117

Query: 324 FTGGFNCVTRGHVMECSADSSSEEAGVKPAGMVCRMNGCDGEAFLCGSNSPCECDFMICR 503
           FTGGFN VTRGHVM+CS + +        +G+VC M GCD +A        CEC F ICR
Sbjct: 118 FTGGFNSVTRGHVMDCSMEMTKS----LKSGLVCGMKGCDEKAI----RGKCECGFKICR 169

Query: 504 DCYLECIASG--GQCPGCKETYRGV 572
           DCYL+C+ +   G CPGCKE Y+ V
Sbjct: 170 DCYLDCVGANAVGHCPGCKEPYKDV 194


>gb|AFZ78586.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 1166

 Score =  179 bits (455), Expect = 3e-43
 Identities = 102/207 (49%), Positives = 126/207 (60%), Gaps = 17/207 (8%)
 Frame = +3

Query: 3   ASPVTITISSGGRGAAEGAMGSSRSMGLTSPAPRHSLPNNLHSPVTASHPXXXXXXXXXX 182
           +SPVTIT+SSG +G      G SRSMGLTSP PR S+ NN +SP++ +            
Sbjct: 10  SSPVTITVSSGCKG------GGSRSMGLTSPVPRTSISNNPNSPLSNNR----NRTSSGG 59

Query: 183 XYCPASASRDEGSEAT-SEFVHYTVHIPPTPDHQPLPS--------------PKRSFISG 317
            YC  S SRD+ +E   S+FV YTVHIPPTPDHQ   +              P RSFISG
Sbjct: 60  RYC--SMSRDDATEENNSDFVSYTVHIPPTPDHQTFSASQSSLAEDIKNASKPDRSFISG 117

Query: 318 TIFTGGFNCVTRGHVMECSADSSSEEAGVKPAGMVCRMNGCDGEAFLCGSNSPCECDFMI 497
           TIFTGGFN VTRGHV++CS +++        +G+VC M GCD +A        CEC F I
Sbjct: 118 TIFTGGFNSVTRGHVIDCSVENNES----LKSGLVCGMKGCDEKAI----KGKCECGFKI 169

Query: 498 CRDCYLECIAS--GGQCPGCKETYRGV 572
           CRDCYL+C+ S  GG+C GCKE Y+ V
Sbjct: 170 CRDCYLDCVGSNGGGRCSGCKEPYKDV 196


>ref|XP_002274010.1| PREDICTED: cellulose synthase-like protein D5-like [Vitis vinifera]
          Length = 1171

 Score =  175 bits (444), Expect = 5e-42
 Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 17/207 (8%)
 Frame = +3

Query: 3   ASPVTITISSGGRGAAEGAMGSSRSMGLTSPAPRHSLPNNLHSPVTASHPXXXXXXXXXX 182
           +SPVTIT+SSGG+G      G+ RSMGLTSP PR S+ NN +SP++              
Sbjct: 10  SSPVTITVSSGGKG------GAIRSMGLTSPVPRSSVLNNPNSPLSGRGNRGSSGGRRT- 62

Query: 183 XYCPASASRDEGSEATSEFVHYTVHIPPTPDHQPLPS--------------PKRSFISGT 320
               ++  R +     SE+V YTVH+PPTPDH P+ +              P+RSFISGT
Sbjct: 63  ----STGGRYDEEVVNSEYVTYTVHMPPTPDHNPISASQTSLNEDDKNLGKPERSFISGT 118

Query: 321 IFTGGFNCVTRGHVMECSADSSSEEAGVKPAGMVCRMNGCDGEAF--LCGSNSPCECDFM 494
           IFTGGFN VTRGHV+EC    S E      +G++C M GCD +A         PCEC F 
Sbjct: 119 IFTGGFNSVTRGHVLEC----SMERKETMKSGILCGMKGCDEKAMQGKVLRGGPCECGFK 174

Query: 495 ICRDCYLECIAS-GGQCPGCKETYRGV 572
           ICR+CYL+C+ S GG CPGCKE Y+ V
Sbjct: 175 ICRECYLDCVGSGGGHCPGCKEPYKDV 201


>ref|XP_002301494.1| predicted protein [Populus trichocarpa] gi|222843220|gb|EEE80767.1|
           predicted protein [Populus trichocarpa]
          Length = 1165

 Score =  171 bits (432), Expect = 1e-40
 Identities = 99/207 (47%), Positives = 123/207 (59%), Gaps = 17/207 (8%)
 Frame = +3

Query: 3   ASPVTITISSGGRGAAEGAMGSSRSMGLTSPAPRHSLPNNLHSPVTASHPXXXXXXXXXX 182
           +SPVTIT+SSG +G      G SRSMGLTSP PR S+ NN +SP++ +            
Sbjct: 10  SSPVTITVSSGCKG------GGSRSMGLTSPVPRTSISNNPNSPLSNNR----NRTSSGG 59

Query: 183 XYCPASASRDEGSEAT-SEFVHYTVHIPPTPDHQPLPS--------------PKRSFISG 317
            YC  S SRD+ +E   SEFV YTVHIPPTPDHQ   +              P RSFISG
Sbjct: 60  RYC--STSRDDATEENNSEFVSYTVHIPPTPDHQIFSASQSSLAEDIKNASKPDRSFISG 117

Query: 318 TIFTGGFNCVTRGHVMECSADSSSEEAGVKPAGMVCRMNGCDGEAFLCGSNSPCECDFMI 497
           TIFTGGFN VTRGHV++CS +++        +G+VC M GCD +A        CEC F +
Sbjct: 118 TIFTGGFNSVTRGHVIDCSVENNES----LKSGLVCGMKGCDEKAI----KGKCECGFKL 169

Query: 498 CRDCYLECIAS--GGQCPGCKETYRGV 572
           CRDCYL+C+ S  GG   G +E Y+ V
Sbjct: 170 CRDCYLDCVGSNGGGHVSGAREPYKDV 196


>gb|ADQ28096.1| celullose synthase-like D protein [Gossypium hirsutum]
          Length = 1175

 Score =  169 bits (429), Expect = 3e-40
 Identities = 102/210 (48%), Positives = 118/210 (56%), Gaps = 20/210 (9%)
 Frame = +3

Query: 3   ASPVTITISSGGRGAAEGAMGSSRSMGLTSPAPRHSLPNNLHSPVTASHPXXXXXXXXXX 182
           +SPVTIT+SS G     G    SRSMGLTSP PR S  NN +SP                
Sbjct: 11  SSPVTITVSSSG-----GKETGSRSMGLTSPVPRASKSNNPNSPSPLGS-RGNRRASSGG 64

Query: 183 XYCPASASRDEG---SEATSEFVHYTVHIPPTPDHQPLPS----------------PKRS 305
            YC  S S+D+     E  SEFV YTVHIPPTPDHQ + +                P+RS
Sbjct: 65  RYC--SMSQDDPIPIEEINSEFVTYTVHIPPTPDHQSISTSQTSLNEEGKDGLKLKPERS 122

Query: 306 FISGTIFTGGFNCVTRGHVMECSADSSSEEAGVKPAGMVCRMNGCDGEAFLCGSNSPCEC 485
           FISGTIFTGG+NCVTRGHV+    D S E      +G+VC M GCD +         CEC
Sbjct: 123 FISGTIFTGGYNCVTRGHVI----DGSLERPETLKSGLVCGMKGCDEKEI----EGKCEC 174

Query: 486 DFMICRDCYLECIAS-GGQCPGCKETYRGV 572
            F IC DCYL+C+AS GG CPGCKE Y+ V
Sbjct: 175 GFKICGDCYLDCVASGGGHCPGCKEPYKDV 204


Top