BLASTX nr result
ID: Dioscorea21_contig00036006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00036006
(580 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 109 7e-26
gb|AAT93883.1| putative polyprotein [Oryza sativa Japonica Group] 85 9e-17
emb|CAN63990.1| hypothetical protein VITISV_016158 [Vitis vinifera] 90 3e-16
gb|ABW74566.1| integrase [Boechera divaricarpa] 73 7e-16
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 74 2e-15
>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
Length = 1109
Score = 109 bits (272), Expect(3) = 7e-26
Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 43/168 (25%)
Frame = -3
Query: 542 RQKMVIGMPSIDHVDDICEGCIYGKHHRASFLVGKAWGAAKLLQLAHTNICGPMQALSLN 363
+++MV G+P ID V+ +CEGCIYGK + F G++ A+ L++ H ++CGPMQ S
Sbjct: 443 KKEMVFGLPKIDSVN-VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQIASFG 501
Query: 362 NI-------------------------------------------DGIQRQLTASYTSDR 312
+G+ R+LT Y+ ++
Sbjct: 502 GSRYFLLFTDDHSRMSWVYFLQSKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQ 561
Query: 311 NDVVKRNSRTVVEMTRIML*AKDCPNSFWAEVAVTVVFLLNISPTKAV 168
N VV+R +RTVVEM R M+ AK+ N FWAE T V+LLNISPTKAV
Sbjct: 562 NGVVERKNRTVVEMARSMMKAKNLSNHFWAEGVATAVYLLNISPTKAV 609
Score = 31.2 bits (69), Expect(3) = 7e-26
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2
Query: 177 KGSLDQTPHEAWCGMKLDVSGLKVF 103
K L++TP+EAW G K VS LKVF
Sbjct: 607 KAVLNRTPYEAWYGRKPWVSHLKVF 631
Score = 22.3 bits (46), Expect(3) = 7e-26
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 64 KIDGKSLKCIYI 29
K+D KS+KCI+I
Sbjct: 646 KLDEKSVKCIFI 657
>gb|AAT93883.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1248
Score = 85.1 bits (209), Expect(2) = 9e-17
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 41/165 (24%)
Frame = -3
Query: 539 QKMVIGMPSIDHVDDICEGCIYGKHHRASFLVGKAWGAAKLLQLAHTNICGPM------- 381
++MV GMP +DH++ +C+ C+ K R F ++ A + L+L H ++CGP+
Sbjct: 339 KEMVRGMPCLDHMEQLCDVCVVTKQRRLPFPQQTSFRAKERLELMHGDLCGPVTPATPGG 398
Query: 380 -------------QALSLNNI---------------------DGIQRQLTASYTSDRNDV 303
+ L ++ +GIQR TA Y+ +N V
Sbjct: 399 RPRERLRMPSGARRPLQRRSVAASCACCAPTTAAEFASYCADEGIQRHYTAPYSPQQNGV 458
Query: 302 VKRNSRTVVEMTRIML*AKDCPNSFWAEVAVTVVFLLNISPTKAV 168
V+R ++TVV M R +L + P FW E VT V++LN SPTKA+
Sbjct: 459 VERRNQTVVGMARALLKHRGMPAIFWGEAVVTAVYILNRSPTKAL 503
Score = 26.9 bits (58), Expect(2) = 9e-17
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 162 QTPHEAWCGMKLDVSGLKVF 103
+TP+EAW G K VS L+VF
Sbjct: 506 KTPYEAWHGHKPAVSHLRVF 525
>emb|CAN63990.1| hypothetical protein VITISV_016158 [Vitis vinifera]
Length = 897
Score = 89.7 bits (221), Expect = 3e-16
Identities = 53/125 (42%), Positives = 65/125 (52%)
Frame = -3
Query: 533 MVIGMPSIDHVDDICEGCIYGKHHRASFLVGKAWGAAKLLQLAHTNICGPMQALSLNNID 354
MV MP I CE C GK HR SF + L+L H++ICGPM SL+N
Sbjct: 306 MVEDMPEITVNAQTCESCELGKQHRKSFPQNMSKRTTHKLELVHSDICGPMSVASLSN-- 363
Query: 353 GIQRQLTASYTSDRNDVVKRNSRTVVEMTRIML*AKDCPNSFWAEVAVTVVFLLNISPTK 174
LTA Y+ +N V +R +RTV+EM R ML K P W T V+LLN PTK
Sbjct: 364 ----NLTAPYSLQQNGVSERKNRTVMEMARCMLFEKKLPKLLWXATVSTSVYLLNRLPTK 419
Query: 173 AVWIK 159
+V K
Sbjct: 420 SVQSK 424
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 73.2 bits (178), Expect(2) = 7e-16
Identities = 35/63 (55%), Positives = 45/63 (71%)
Frame = -3
Query: 356 DGIQRQLTASYTSDRNDVVKRNSRTVVEMTRIML*AKDCPNSFWAEVAVTVVFLLNISPT 177
+GI +LT +YT ++N V +R + TVVEM R ML ++ PN FWAE T V+LLNISPT
Sbjct: 425 EGIHHELTTAYTPEQNGVAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYLLNISPT 484
Query: 176 KAV 168
KAV
Sbjct: 485 KAV 487
Score = 35.8 bits (81), Expect(2) = 7e-16
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 177 KGSLDQTPHEAWCGMKLDVSGLKVFXXXXXXXXXXXXXXSMGKV*NAYI---YIDETKGY 7
K L++TP+EAWCG K VS L+VF + + I Y ++KGY
Sbjct: 485 KAVLNRTPYEAWCGRKPGVSHLRVFGSVCYSLIDAHNRKKLDEKSEKCIFLGYCSQSKGY 544
Query: 6 RV 1
R+
Sbjct: 545 RL 546
Score = 63.5 bits (153), Expect = 2e-08
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -3
Query: 542 RQKMVIGMPSIDHVDDICEGCIYGKHHRASFLVGKAWGAAKLLQLAHTNICGPMQALSL 366
++ MVIG+P I + +CEGC+YGK R SF VG+A A + L++ H ++CGPMQ SL
Sbjct: 298 QKDMVIGLPKIGALK-LCEGCVYGKQSRRSFPVGRARRATQYLEIVHADLCGPMQTASL 355
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 73.9 bits (180), Expect(3) = 2e-15
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = -3
Query: 356 DGIQRQLTASYTSDRNDVVKRNSRTVVEMTRIML*AKDCPNSFWAEVAVTVVFLLNISPT 177
+G+ R+LT Y+ ++N V +R +RTVVEM R M+ AK+ N FWAE T V+LLNISPT
Sbjct: 695 EGLHRELTTPYSPEQNGVAERKNRTVVEMARSMMXAKNLSNHFWAEGVATAVYLLNISPT 754
Query: 176 KAV 168
KAV
Sbjct: 755 KAV 757
Score = 31.2 bits (69), Expect(3) = 2e-15
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -2
Query: 177 KGSLDQTPHEAWCGMKLDVSGLKVF 103
K L++TP+EAW G K VS LKVF
Sbjct: 755 KAVLNRTPYEAWYGRKPWVSHLKVF 779
Score = 22.3 bits (46), Expect(3) = 2e-15
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 64 KIDGKSLKCIYI 29
K+D KS+KCI+I
Sbjct: 794 KLDEKSVKCIFI 805
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = -3
Query: 542 RQKMVIGMPSIDHVDDICEGCIYGKHHRASFLVGKAWGAAKLLQLAHTNICGPMQALS 369
+++MV +P ID V+ +CEGCIYGK + F G++ A+ L++ H ++CGPMQ S
Sbjct: 568 KKEMVFELPKIDSVN-VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTAS 624