BLASTX nr result

ID: Dioscorea21_contig00035920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035920
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452535.1| hypothetical protein SORBIDRAFT_04g027540 [S...    69   5e-10
ref|XP_003570617.1| PREDICTED: uncharacterized protein LOC100822...    65   6e-09
ref|NP_001170417.1| uncharacterized protein LOC100384404 [Zea ma...    63   2e-08
gb|AFW73493.1| putative MYB DNA-binding domain superfamily prote...    60   2e-07
ref|XP_002301053.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002452535.1| hypothetical protein SORBIDRAFT_04g027540 [Sorghum bicolor]
           gi|241932366|gb|EES05511.1| hypothetical protein
           SORBIDRAFT_04g027540 [Sorghum bicolor]
          Length = 330

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
 Frame = +2

Query: 5   PWDDHSMRLQAEAVQNAKLQYLQCLIQSAAAMAGNSTTNS--PSSVAAELEPMNLLNXXX 178
           PWDDH+ R+Q EAVQ AKLQ LQ L+QSAA++A + +++S   +++ ++LE + LL+   
Sbjct: 153 PWDDHTARIQVEAVQAAKLQCLQNLLQSAASIATSPSSSSINTNTIPSDLEQIGLLSPPQ 212

Query: 179 XXXXXXXXXXXXXXV----------HLPELQIPSSFEQQQPLSYETNHQESSF 307
                                     LP++QIPSSF +QQP S + N Q S F
Sbjct: 213 MSSLSTLPSPSFLESISGQDIAAAGQLPDIQIPSSFFEQQPTSNDAN-QHSDF 264


>ref|XP_003570617.1| PREDICTED: uncharacterized protein LOC100822645 [Brachypodium
           distachyon]
          Length = 329

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
 Frame = +2

Query: 5   PWDDHSM-RLQAEAVQNAKLQYLQCLIQSAAAMAGNSTTNSPSSVAAELEPMNLLNXXXX 181
           PWD+H+  +LQ EAVQ AKL+YLQCL+QSAAA+A + +++S +++  +LE ++LL+    
Sbjct: 153 PWDEHTPNQLQTEAVQAAKLEYLQCLLQSAAAIAASPSSSSINTIPGDLEQISLLSPPQI 212

Query: 182 XXXXXXXXXXXXXV---------HLPELQIPSSFEQQQPLSYETN 289
                                   LP++Q+PSS   +QP+   TN
Sbjct: 213 SSLSSLSSPRILEGINCQDLVTGQLPDIQMPSSSFFEQPIINGTN 257


>ref|NP_001170417.1| uncharacterized protein LOC100384404 [Zea mays]
           gi|224035733|gb|ACN36942.1| unknown [Zea mays]
          Length = 297

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
 Frame = +2

Query: 5   PWDDHSMRLQAEAVQNAKLQYLQCLIQSAAAMAGNSTTNSPSSVAAEL------EPMNLL 166
           PWDDH+ R+Q EAVQ AKLQ LQ L+QSAA++    +++S +++ ++L      +  +L 
Sbjct: 128 PWDDHAARIQVEAVQAAKLQCLQNLLQSAASITTTPSSSSMNTIPSDLGLLSPPQMSSLS 187

Query: 167 NXXXXXXXXXXXXXXXXXVHLPELQIPSSFEQQQPLSYETNHQ 295
                               L ++QIPSSF  +QP S E NHQ
Sbjct: 188 TLPSPSFLESISGQDMVAGQLSDIQIPSSF-FEQPTSNEANHQ 229


>gb|AFW73493.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 322

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
 Frame = +2

Query: 5   PWDDHSMRLQAEAVQNAKLQYLQCLIQSAAAMAGNSTTNSPSSVAAEL------EPMNLL 166
           PWDDH+ R+Q EAVQ AKLQ LQ L+QSAA++    +++S +++ ++L      +  +L 
Sbjct: 153 PWDDHAARIQVEAVQAAKLQCLQNLLQSAASITTTPSSSSMNTIPSDLGLLSPPQMSSLS 212

Query: 167 NXXXXXXXXXXXXXXXXXVHLPELQIPSSFEQQQPLSYETNHQ 295
                               L ++QIPSSF  +QP S E N Q
Sbjct: 213 TLPSPSFLESISGQDMVAGQLSDIQIPSSF-FEQPTSNEANQQ 254


>ref|XP_002301053.1| predicted protein [Populus trichocarpa] gi|222842779|gb|EEE80326.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/56 (51%), Positives = 43/56 (76%)
 Frame = +2

Query: 2   NPWDDHSMRLQAEAVQNAKLQYLQCLIQSAAAMAGNSTTNSPSSVAAELEPMNLLN 169
           +P D+H+M LQAEA+Q AKLQYLQCL+QSAA++  ++ +   + +  +LE +NLLN
Sbjct: 152 HPLDEHAMGLQAEALQLAKLQYLQCLLQSAASLIPSANSYDQNGI-TDLEVLNLLN 206


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