BLASTX nr result

ID: Dioscorea21_contig00035899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035899
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063351.1| Os09g0454300 [Oryza sativa Japonica Group] g...   127   1e-27
gb|EEE69843.1| hypothetical protein OsJ_29610 [Oryza sativa Japo...   127   1e-27
ref|XP_003578224.1| PREDICTED: F-box protein At1g10780-like [Bra...   124   8e-27
ref|XP_002460321.1| hypothetical protein SORBIDRAFT_02g026460 [S...   116   2e-24
ref|XP_003531584.1| PREDICTED: F-box protein At1g10780-like [Gly...   112   2e-23

>ref|NP_001063351.1| Os09g0454300 [Oryza sativa Japonica Group]
           gi|51535215|dbj|BAD38264.1| F-box protein-like [Oryza
           sativa Japonica Group] gi|51535955|dbj|BAD38037.1| F-box
           protein-like [Oryza sativa Japonica Group]
           gi|113631584|dbj|BAF25265.1| Os09g0454300 [Oryza sativa
           Japonica Group] gi|215693359|dbj|BAG88741.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218202270|gb|EEC84697.1| hypothetical protein
           OsI_31628 [Oryza sativa Indica Group]
          Length = 428

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/92 (65%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 CDGCSSVSIELDCLEKCRLDFLGSANSSVHLSSPKLVILELQGFSWIHVNERHSLRRLSI 98
           CD   +VSIEL  LE+CRLDFLG+ N S+ L++P++  LE+QGF+WI +   HSLRRLSI
Sbjct: 193 CDCSGAVSIELALLERCRLDFLGAGNCSLSLAAPRVESLEVQGFTWITLRGGHSLRRLSI 252

Query: 97  AKTSGSVYKVDVGKLPDLEYLSIRGVQWSWNA 2
           AK++G VYKVD GKLPDLE+LS+RGVQWSW A
Sbjct: 253 AKSTGRVYKVDTGKLPDLEHLSLRGVQWSWAA 284


>gb|EEE69843.1| hypothetical protein OsJ_29610 [Oryza sativa Japonica Group]
          Length = 404

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/92 (65%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 CDGCSSVSIELDCLEKCRLDFLGSANSSVHLSSPKLVILELQGFSWIHVNERHSLRRLSI 98
           CD   +VSIEL  LE+CRLDFLG+ N S+ L++P++  LE+QGF+WI +   HSLRRLSI
Sbjct: 169 CDCSGAVSIELALLERCRLDFLGAGNCSLSLAAPRVESLEVQGFTWITLRGGHSLRRLSI 228

Query: 97  AKTSGSVYKVDVGKLPDLEYLSIRGVQWSWNA 2
           AK++G VYKVD GKLPDLE+LS+RGVQWSW A
Sbjct: 229 AKSTGRVYKVDTGKLPDLEHLSLRGVQWSWAA 260


>ref|XP_003578224.1| PREDICTED: F-box protein At1g10780-like [Brachypodium distachyon]
          Length = 413

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -2

Query: 277 CDGCSSVSIELDCLEKCRLDFLGSANSSVHLSSPKLVILELQGFSWIHVNERHSLRRLSI 98
           CD    VSIEL  L++CRLDFL   N S+ LS+P++  LE+QGFSWI +   HSLRRLSI
Sbjct: 178 CDCSGEVSIELSLLQRCRLDFLAGGNCSLSLSAPRVESLEVQGFSWITLQGGHSLRRLSI 237

Query: 97  AKTSGSVYKVDVGKLPDLEYLSIRGVQWSWNA 2
           AK+ G VYKV  GKLPDLEYLS+RGVQWSW A
Sbjct: 238 AKSMGRVYKVSTGKLPDLEYLSMRGVQWSWAA 269


>ref|XP_002460321.1| hypothetical protein SORBIDRAFT_02g026460 [Sorghum bicolor]
           gi|241923698|gb|EER96842.1| hypothetical protein
           SORBIDRAFT_02g026460 [Sorghum bicolor]
          Length = 422

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/92 (57%), Positives = 73/92 (79%)
 Frame = -2

Query: 277 CDGCSSVSIELDCLEKCRLDFLGSANSSVHLSSPKLVILELQGFSWIHVNERHSLRRLSI 98
           CD   +V+I+L  L++CRLD +G+ N S+ L++P++  LE+QGFSWI +   HSLRRLSI
Sbjct: 187 CDCSGTVAIDLQLLQRCRLDIVGAGNCSLLLTAPRVESLEIQGFSWITLRGGHSLRRLSI 246

Query: 97  AKTSGSVYKVDVGKLPDLEYLSIRGVQWSWNA 2
           AK+SG V+KVD G LPDL++LS+RGVQW+W A
Sbjct: 247 AKSSGRVHKVDTGNLPDLDHLSLRGVQWNWAA 278


>ref|XP_003531584.1| PREDICTED: F-box protein At1g10780-like [Glycine max]
          Length = 419

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/92 (57%), Positives = 68/92 (73%)
 Frame = -2

Query: 277 CDGCSSVSIELDCLEKCRLDFLGSANSSVHLSSPKLVILELQGFSWIHVNERHSLRRLSI 98
           C+G +S+SI+L  LE+C+LDF G  N S+ LSSPK+  LE+QG SWI V E   LR LSI
Sbjct: 184 CEGVASISIDLPYLEQCKLDFYGPGNCSLTLSSPKIESLEVQGCSWIRVPETQHLRNLSI 243

Query: 97  AKTSGSVYKVDVGKLPDLEYLSIRGVQWSWNA 2
           + ++G VY VD GKLP L +LS+RG+QW WNA
Sbjct: 244 SNSAGRVYMVDFGKLPALVFLSMRGIQWCWNA 275


Top