BLASTX nr result

ID: Dioscorea21_contig00035894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035894
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW74566.1| integrase [Boechera divaricarpa]                       228   5e-58
gb|ABR16288.1| unknown [Picea sitchensis]                             227   7e-58
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   225   3e-57
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   224   7e-57
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   222   2e-56

>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  228 bits (580), Expect = 5e-58
 Identities = 107/167 (64%), Positives = 134/167 (80%)
 Frame = +1

Query: 16   IQKHKARLVAKGYVQEYGVDYEEIFSPIARMDTVRILLSLAAHKDWLVFQLDVKSAFLNG 195
            IQK+KARLV KGY QEYGVDYE+ FSP+AR DT+R LL+L A+  W ++Q DVKSAFLNG
Sbjct: 707  IQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNG 766

Query: 196  DIEEEVYVDQPKGFEIQGKEHMVYKLHKALYGLKQAPRAWYSKLDSYFQKQGFKRSATEY 375
            ++ EEVYVDQP+GF ++G+E  VY+L+KALYGLKQAPRAWY+K+DSYF + GF+RS +E 
Sbjct: 767  ELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEP 826

Query: 376  TLYTKVGDQGEILLVCVYVDDLICMGSSQLLVENFREDMKKTFEMND 516
            TLY K    G+IL+VC+YVDD+I MGSS  LV  F+  M + FEM D
Sbjct: 827  TLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTD 873


>gb|ABR16288.1| unknown [Picea sitchensis]
          Length = 363

 Score =  227 bits (579), Expect = 7e-58
 Identities = 109/172 (63%), Positives = 138/172 (80%)
 Frame = +1

Query: 1   KPNGEIQKHKARLVAKGYVQEYGVDYEEIFSPIARMDTVRILLSLAAHKDWLVFQLDVKS 180
           K NGE+ KHKARLVAKG+ QEYGVDY E F+P+AR+DT+R++L++AA  +W V+Q+DVKS
Sbjct: 37  KANGELDKHKARLVAKGFAQEYGVDYNETFAPVARLDTIRMVLAIAAQHNWKVYQMDVKS 96

Query: 181 AFLNGDIEEEVYVDQPKGFEIQGKEHMVYKLHKALYGLKQAPRAWYSKLDSYFQKQGFKR 360
           AFLNG +EEEVYV QP  +E++G+E  VY+L KAL GLKQAPRAWYSK+DSY  K  F R
Sbjct: 97  AFLNGYLEEEVYVQQPPRYEVRGQEDKVYRLKKALNGLKQAPRAWYSKIDSYMIKNEFIR 156

Query: 361 SATEYTLYTKVGDQGEILLVCVYVDDLICMGSSQLLVENFREDMKKTFEMND 516
           S +E TLYTKV +QG+IL+VC+YVDDLI  G+  L ++ F+  MKK FEM D
Sbjct: 157 STSEPTLYTKVNEQGQILIVCLYVDDLIYTGN--LTIDMFKSAMKKEFEMTD 206


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  225 bits (574), Expect = 3e-57
 Identities = 110/170 (64%), Positives = 135/170 (79%)
 Frame = +1

Query: 7    NGEIQKHKARLVAKGYVQEYGVDYEEIFSPIARMDTVRILLSLAAHKDWLVFQLDVKSAF 186
            +G IQKHKARLVAKGY Q+ GVD++E FSP+AR +TVR++L+LAA     V+Q DVKSAF
Sbjct: 873  DGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAF 932

Query: 187  LNGDIEEEVYVDQPKGFEIQGKEHMVYKLHKALYGLKQAPRAWYSKLDSYFQKQGFKRSA 366
            LNGD+EEEVYV QP+GF I G E+ VYKL KALYGLKQAPRAWYSK+DS+FQ  GF+RS 
Sbjct: 933  LNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSD 992

Query: 367  TEYTLYTKVGDQGEILLVCVYVDDLICMGSSQLLVENFREDMKKTFEMND 516
             E TLY K     E LLVC+YVDD+I +GSS+ LV +F+ +M + FEM+D
Sbjct: 993  NEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSD 1042


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  224 bits (570), Expect = 7e-57
 Identities = 99/170 (58%), Positives = 139/170 (81%)
 Frame = +1

Query: 7    NGEIQKHKARLVAKGYVQEYGVDYEEIFSPIARMDTVRILLSLAAHKDWLVFQLDVKSAF 186
            NGE+ K+KARLVAKGY Q+YG DY E+F+P+AR++T+RI++SLAA KDW+++QLDVKSAF
Sbjct: 632  NGEVDKYKARLVAKGYSQQYGXDYVEVFAPVARLETIRIVISLAAQKDWMIYQLDVKSAF 691

Query: 187  LNGDIEEEVYVDQPKGFEIQGKEHMVYKLHKALYGLKQAPRAWYSKLDSYFQKQGFKRSA 366
            L+G+I EE +V+QP G+E +GKE  VY+L KALYGLKQAPRAWYS+++SYF K+GF +  
Sbjct: 692  LHGEIHEEXFVEQPPGYEQKGKESKVYRLKKALYGLKQAPRAWYSRIESYFIKEGFNKCP 751

Query: 367  TEYTLYTKVGDQGEILLVCVYVDDLICMGSSQLLVENFREDMKKTFEMND 516
             E+TL+TK  + G+IL+VC+YVD+LI  G+ + + + F++ M   F+M D
Sbjct: 752  YEHTLFTKTAEGGKILIVCLYVDELIFTGNDESMFKQFKKSMMVEFDMTD 801


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/170 (61%), Positives = 133/170 (78%)
 Frame = +1

Query: 7    NGEIQKHKARLVAKGYVQEYGVDYEEIFSPIARMDTVRILLSLAAHKDWLVFQLDVKSAF 186
            +G IQKHKARLVAKGY Q++GVDY++ FSP+AR +TVR LL+LAAH  W V+Q DVKSAF
Sbjct: 973  DGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETVRTLLALAAHMHWCVYQFDVKSAF 1032

Query: 187  LNGDIEEEVYVDQPKGFEIQGKEHMVYKLHKALYGLKQAPRAWYSKLDSYFQKQGFKRSA 366
            LNG++ EEVY  QP+GF +  KE  VY+L  ALYGLKQAPRAWYSK+DSYF + GF++S 
Sbjct: 1033 LNGELVEEVYXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVENGFEKSK 1092

Query: 367  TEYTLYTKVGDQGEILLVCVYVDDLICMGSSQLLVENFREDMKKTFEMND 516
            +E  LY K   + ++L++C+YVDD+I MGSS  L+  F+  MKK FEM+D
Sbjct: 1093 SEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSD 1142


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