BLASTX nr result

ID: Dioscorea21_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035878
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_003521565.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...    84   9e-15
ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-...    84   9e-15
ref|XP_003628475.1| E3 ubiquitin-protein ligase BAH1 [Medicago t...    82   6e-14

>ref|XP_002320347.1| predicted protein [Populus trichocarpa] gi|222861120|gb|EEE98662.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/98 (48%), Positives = 59/98 (60%)
 Frame = +2

Query: 2   KRYQEYMMQGSNKGLPEVPXXXXXXXXXXCMTKSHSQHHQHNPSTSLSPHCPVCDATFFP 181
           K+YQEYM QG  K LP V           C  +   + HQ +   S   HCPVCD TFFP
Sbjct: 5   KKYQEYM-QGQQKQLPGVDFKKLKKILKKC--RKDFESHQDHDGQSCPHHCPVCDGTFFP 61

Query: 182 SLLKEISAVVCCFNEKAKTLLELHTSSCSIKCILWFGG 295
           SL+KE+SAVV CFN++A+ LLELH +S   K  +WF G
Sbjct: 62  SLVKEMSAVVGCFNKRAQKLLELHLASGFRKYFMWFQG 99


>ref|XP_002302708.1| predicted protein [Populus trichocarpa] gi|222844434|gb|EEE81981.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/98 (48%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   KRYQEYMMQGSNKGLPEVPXXXXXXXXXXCMTKSHSQHHQHNPSTSLSPHCPVCDATFFP 181
           K+YQEYM QG    LP V           C  +   + HQ +   S   HC VCD TFFP
Sbjct: 5   KKYQEYM-QGKENRLPAVDFKKLKKILKKC--REDFESHQEHDGQSCPHHCSVCDGTFFP 61

Query: 182 SLLKEISAVVCCFNEKAKTLLELHTSSCSIKCILWFGG 295
           SLLKE+SAVV CFNE+A+ LLELH  S   K  +WF G
Sbjct: 62  SLLKEMSAVVGCFNERAQKLLELHLVSGFRKYFMWFKG 99


>ref|XP_003521565.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 2 [Glycine
           max]
          Length = 322

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   KRYQEYMMQGSNKGLPEVPXXXXXXXXXXCMTKSHSQH--HQHNPSTSLSPHCPVCDATF 175
           K+YQEYM QG  K LP V           C   S SQ   H    + +   HCPVCD TF
Sbjct: 5   KKYQEYM-QGQEKKLPGVGFKKLKKILKKCRRNSSSQKPLHASLAAKTCPDHCPVCDGTF 63

Query: 176 FPSLLKEISAVVCCFNEKAKTLLELHTSSCSIKCILWFGG 295
           FPSLL E+S +V CFN++A+ LLELH +S   K  LW  G
Sbjct: 64  FPSLLNEMSDIVGCFNQRAQKLLELHLASGVRKYFLWIKG 103


>ref|XP_003521564.1| PREDICTED: E3 ubiquitin-protein ligase BAH1-like isoform 1 [Glycine
           max]
          Length = 324

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/100 (47%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   KRYQEYMMQGSNKGLPEVPXXXXXXXXXXCMTKSHSQH--HQHNPSTSLSPHCPVCDATF 175
           K+YQEYM QG  K LP V           C   S SQ   H    + +   HCPVCD TF
Sbjct: 5   KKYQEYM-QGQEKKLPGVGFKKLKKILKKCRRNSSSQKPLHASLAAKTCPDHCPVCDGTF 63

Query: 176 FPSLLKEISAVVCCFNEKAKTLLELHTSSCSIKCILWFGG 295
           FPSLL E+S +V CFN++A+ LLELH +S   K  LW  G
Sbjct: 64  FPSLLNEMSDIVGCFNQRAQKLLELHLASGVRKYFLWIKG 103


>ref|XP_003628475.1| E3 ubiquitin-protein ligase BAH1 [Medicago truncatula]
           gi|355522497|gb|AET02951.1| E3 ubiquitin-protein ligase
           BAH1 [Medicago truncatula]
          Length = 175

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/98 (45%), Positives = 53/98 (54%)
 Frame = +2

Query: 2   KRYQEYMMQGSNKGLPEVPXXXXXXXXXXCMTKSHSQHHQHNPSTSLSPHCPVCDATFFP 181
           K+YQEYM     K LPEV           C   S       + S     HC VCD TFFP
Sbjct: 5   KKYQEYMQGQEQKKLPEVGFKKLKKILKKCRRDS-------SQSQPCPDHCSVCDGTFFP 57

Query: 182 SLLKEISAVVCCFNEKAKTLLELHTSSCSIKCILWFGG 295
           SLL E+S +V CFN++A+ LLELH +S   K ILWF G
Sbjct: 58  SLLSEMSEIVGCFNQRAQKLLELHLASGFRKYILWFKG 95


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