BLASTX nr result

ID: Dioscorea21_contig00035841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035841
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance prote...    64   1e-08
emb|CBI26001.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002519313.1| ATP-binding cassette transporter, putative [...    64   1e-08
ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance prote...    63   2e-08

>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
           predicted protein [Populus trichocarpa]
          Length = 1368

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = +3

Query: 69  PGFISERSSSING---SLREENDDEKELQWAAIEXXXXXXXXXXXXFEYESE*SGGMVKA 239
           P FI   +++ +    S  EEN+DE ELQWAAIE            F+ + +  G   K 
Sbjct: 9   PSFIGSAATNCDATSLSSLEENEDEIELQWAAIERLPTFRRLRLSLFDKKEDGEGEEGKR 68

Query: 240 KVDVTKLRATERRLFIESLIKHIENNKLKLLQK 338
            VDVTKL A ER +F++ LIK IE +  +LL K
Sbjct: 69  VVDVTKLEALERHVFVDKLIKKIEEDNCRLLSK 101


>ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1492

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = +3

Query: 87  RSSSINGSLREENDDEKELQWAAIEXXXXXXXXXXXXFEYESE*SGGMV----KAKVDVT 254
           RSSS +    +E+D+E EL WAAIE            F  + +   G      K  VDVT
Sbjct: 75  RSSSTHTESIKEDDEEHELLWAAIERLPTFRRVRTSLFSDDHDDGDGTGEFEGKRMVDVT 134

Query: 255 KLRATERRLFIESLIKHIENNKLKLLQK 338
           KL   ERR+F+E LIKHIE++ L+LLQK
Sbjct: 135 KLEDLERRMFVEKLIKHIEHDNLRLLQK 162


>emb|CBI26001.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = +3

Query: 87  RSSSINGSLREENDDEKELQWAAIEXXXXXXXXXXXXFEYESE*SGGMV----KAKVDVT 254
           RSSS +    +E+D+E EL WAAIE            F  + +   G      K  VDVT
Sbjct: 72  RSSSTHTESIKEDDEEHELLWAAIERLPTFRRVRTSLFSDDHDDGDGTGEFEGKRMVDVT 131

Query: 255 KLRATERRLFIESLIKHIENNKLKLLQK 338
           KL   ERR+F+E LIKHIE++ L+LLQK
Sbjct: 132 KLEDLERRMFVEKLIKHIEHDNLRLLQK 159


>ref|XP_002519313.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223541628|gb|EEF43177.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1393

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 50/77 (64%)
 Frame = +3

Query: 108 SLREENDDEKELQWAAIEXXXXXXXXXXXXFEYESE*SGGMVKAKVDVTKLRATERRLFI 287
           S+ E+ND++ +LQWAA+E            FE E++ S    K  VDV KL A ER++FI
Sbjct: 40  SVAEDNDEQTQLQWAAVERLPTLRRITTALFE-ETDGSDSKGKRIVDVAKLGAQERQMFI 98

Query: 288 ESLIKHIENNKLKLLQK 338
           E LIKH++++ L+LL+K
Sbjct: 99  EKLIKHVDHDNLRLLKK 115


>ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1448

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = +3

Query: 81  SERSSSINGSLREENDDEKELQWAAIEXXXXXXXXXXXXFEYESE*S--GGMVKAKVDVT 254
           S RSSS   SL+++  +E +LQW  IE            F+   + S   G  K  VDVT
Sbjct: 34  SFRSSS--ASLKDDAVEEHDLQWTDIERLPTFERLRSSLFDEYDDGSRVDGEGKRVVDVT 91

Query: 255 KLRATERRLFIESLIKHIENNKLKLLQK 338
           K+ A ERR+FIE LIKHIEN+ L+LLQK
Sbjct: 92  KIGAPERRMFIEKLIKHIENDNLRLLQK 119


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