BLASTX nr result

ID: Dioscorea21_contig00035816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00035816
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550657.1| PREDICTED: uncharacterized protein LOC100778...   248   6e-64
ref|XP_002531659.1| [ribulose-bisphosphate carboxylase]-lysine N...   243   2e-62
ref|XP_003610130.1| 3-hydroxy-3-methylglutaryl-coenzyme A reduct...   242   3e-62
ref|XP_002329631.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
ref|NP_001151788.1| SET domain containing protein [Zea mays] gi|...   239   2e-61

>ref|XP_003550657.1| PREDICTED: uncharacterized protein LOC100778605 [Glycine max]
          Length = 549

 Score =  248 bits (632), Expect = 6e-64
 Identities = 110/165 (66%), Positives = 131/165 (79%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   LFSNHPKIFQPELYSWEQFLWACELWYSNGMKVILSDGKLKTCLVPIAGLLNHSICPHII 181
           L +N P IF PELY+WE+FLWACELWYSN MK++ SDGKL+TCL+P+AG LNHS+CPH++
Sbjct: 290 LCNNFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHVM 349

Query: 182 HYGRVDSATKSLKFPLSRPCKKGEQCYLSYGSFPGSHFVTFYGFLPKGDNPYDVIPLDIE 361
           HYG+VD AT SLKF LSRPC+ GE+C LSYG+F  SH +TFYGFLP+GDN YDVIPLDI+
Sbjct: 350 HYGKVDPATNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNSYDVIPLDID 409

Query: 362 APHAEDTHS--ASDWTTHMVRGTWLSKSEEPPSCGLPSPLLYHLR 490
               +       S+WTTHMVRGTWLSK     + GLPSPLL HLR
Sbjct: 410 GSDVDSNEDIPVSNWTTHMVRGTWLSKDHRIFNYGLPSPLLDHLR 454


>ref|XP_002531659.1| [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase,
           putative [Ricinus communis] gi|223528717|gb|EEF30729.1|
           [ribulose-bisphosphate carboxylase]-lysine
           N-methyltransferase, putative [Ricinus communis]
          Length = 558

 Score =  243 bits (619), Expect = 2e-62
 Identities = 109/161 (67%), Positives = 128/161 (79%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   LFSNHPKIFQPELYSWEQFLWACELWYSNGMKVILSDGKLKTCLVPIAGLLNHSICPHII 181
           L +N+P +F PELY+WEQFLWACELWYSN MK+   DGKL+TCL+PIAG LNHS+ PHII
Sbjct: 302 LCNNYPDVFPPELYTWEQFLWACELWYSNSMKIKFLDGKLRTCLIPIAGFLNHSLHPHII 361

Query: 182 HYGRVDSATKSLKFPLSRPCKKGEQCYLSYGSFPGSHFVTFYGFLPKGDNPYDVIPLDIE 361
           HYG+VDS T +LKFPLSRPC+ GEQC LSYG+F G+H +TFYGFLP+GDN YD+IPLDI+
Sbjct: 362 HYGKVDSITNTLKFPLSRPCRVGEQCCLSYGNFSGAHLITFYGFLPQGDNRYDIIPLDID 421

Query: 362 APHAEDTHSA--SDWTTHMVRGTWLSKSEEPPSCGLPSPLL 478
           A  A+ T     S W THMVRGTWLSK+      GLP PLL
Sbjct: 422 AGEADSTEDCPMSSWATHMVRGTWLSKNHNIFCYGLPCPLL 462


>ref|XP_003610130.1| 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Medicago
           truncatula] gi|355511185|gb|AES92327.1|
           3-hydroxy-3-methylglutaryl-coenzyme A reductase
           [Medicago truncatula]
          Length = 689

 Score =  242 bits (618), Expect = 3e-62
 Identities = 108/165 (65%), Positives = 130/165 (78%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   LFSNHPKIFQPELYSWEQFLWACELWYSNGMKVILSDGKLKTCLVPIAGLLNHSICPHII 181
           L +  P IF PE+Y+WE FLWACELWYSN MK++ SDGKL+TCL+P+AG LNHS+CPHI 
Sbjct: 430 LCNGFPDIFPPEIYTWENFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHIT 489

Query: 182 HYGRVDSATKSLKFPLSRPCKKGEQCYLSYGSFPGSHFVTFYGFLPKGDNPYDVIPLDIE 361
           HYG+VD +T SLKF LSR C+ GE+C LSYG+F  SHF+TFYGFLP+GDNPYDVIPLDI+
Sbjct: 490 HYGKVDPSTNSLKFCLSRSCRSGEECCLSYGNFSSSHFITFYGFLPQGDNPYDVIPLDID 549

Query: 362 APHAE--DTHSASDWTTHMVRGTWLSKSEEPPSCGLPSPLLYHLR 490
           +   +  +    S+WTTHMVRGTWLS +      GLPSPLL HLR
Sbjct: 550 SSDVDSIEDKPVSNWTTHMVRGTWLSNNHSIFYYGLPSPLLDHLR 594


>ref|XP_002329631.1| predicted protein [Populus trichocarpa] gi|222870512|gb|EEF07643.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  239 bits (611), Expect = 2e-61
 Identities = 113/185 (61%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
 Frame = +2

Query: 2   LFSNHPKIFQPELYSWEQFLWACELWYSNGMKVILSDGKLKTCLVPIAGLLNHSICPHII 181
           L  N+P +F PELY+WEQFLWACELWYSN MKV+  DGKL+TCL+PIAG LNHS+ PHI+
Sbjct: 261 LCKNYPDVFLPELYTWEQFLWACELWYSNSMKVMFVDGKLRTCLIPIAGFLNHSLYPHIV 320

Query: 182 HYGRVDSATKSLKFPLSRPCKKGEQCYLSYGSFPGSHFVTFYGFLPKGDNPYDVIPLDIE 361
           HYG+VDSAT +LKFPL+RPC  GEQC LSYG+F  SH +TFYGF+P+GDNP DVIPLDI+
Sbjct: 321 HYGKVDSATNTLKFPLTRPCCFGEQCCLSYGNFSSSHLITFYGFMPQGDNPCDVIPLDID 380

Query: 362 APHAE--DTHSASDWTTHMVRGTWLSKSEEPPSCGLPSPLLYHLRSIIEYDGNQLPPSPS 535
              A+  +    S WT+HMVRGTWLS +      GLPSPLL +LR      G + P   +
Sbjct: 381 VGDADCIEGCPTSSWTSHMVRGTWLSNNHNIFYYGLPSPLLDYLR------GARSPAPHT 434

Query: 536 RRVEI 550
           + +EI
Sbjct: 435 KTIEI 439


>ref|NP_001151788.1| SET domain containing protein [Zea mays]
           gi|195649689|gb|ACG44312.1| SET domain containing
           protein [Zea mays]
          Length = 536

 Score =  239 bits (611), Expect = 2e-61
 Identities = 109/171 (63%), Positives = 133/171 (77%), Gaps = 5/171 (2%)
 Frame = +2

Query: 2   LFSNHPKIFQPELYSWEQFLWACELWYSNGMKVILSDGKLKTCLVPIAGLLNHSICPHII 181
           L +N P++F+ ++ +W+ FLWACELWYSN M ++LS GKL TCLVP+AGLLNHS+ PHI+
Sbjct: 296 LCTNFPEMFRKDVCTWDDFLWACELWYSNSMMIVLSSGKLSTCLVPVAGLLNHSVSPHIL 355

Query: 182 HYGRVDSATKSLKFPLSRPCKKGEQCYLSYGSFPGSHFVTFYGFLPKGDNPYDVIPLDIE 361
           +YGRVD ATKSLKFPLSRPC  GEQC+LSYG  PGSH VTFYGFLP+GDNPYDVIPLD++
Sbjct: 356 NYGRVDEATKSLKFPLSRPCDAGEQCFLSYGKHPGSHLVTFYGFLPRGDNPYDVIPLDLD 415

Query: 362 A-----PHAEDTHSASDWTTHMVRGTWLSKSEEPPSCGLPSPLLYHLRSII 499
                   A  + + +  TTHMVRGTWLS S   P+ GLP PLL HLR+ +
Sbjct: 416 TSVDDEDIAAQSSATTSQTTHMVRGTWLSTSGGFPTYGLPQPLLTHLRAAL 466


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